U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    NEO1 neogenin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705160, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    NEO1provided by VGNC
    Official Full Name
    neogenin 1provided by VGNC
    Primary source
    VGNC:VGNC:75314
    See related
    Ensembl:ENSMMUG00000009584
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See NEO1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (49879071..50137235)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (50560091..50818403, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106999237 Neighboring gene ADP dependent glucokinase Neighboring gene nucleophosmin pseudogene Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium channel 4 Neighboring gene REC114 meiotic recombination protein Neighboring gene neuroplastin

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    neogenin
    Names
    neogenin homolog 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261500.1 → NP_001248429.1  neogenin precursor

      See identical proteins and their annotated locations for NP_001248429.1

      Status: PROVISIONAL

      Source sequence(s)
      JV047159
      UniProtKB/TrEMBL
      F7ADF9, H9FUV0, H9FUV1
      Related
      ENSMMUP00000012530.3, ENSMMUT00000013375.4
      Conserved Domains (8) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:262 → 326
      IGc2; Immunoglobulin C-2 Type
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:739 → 818
      FN3; Fibronectin type 3 domain
      cd00063
      Location:539 → 628
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:341 → 427
      I-set; Immunoglobulin I-set domain
      pfam06583
      Location:1147 → 1450
      Neogenin_C; Neogenin C-terminus
      pfam13895
      Location:157 → 239
      Ig_2; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      49879071..50137235
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142630.2 → XP_014998116.1  neogenin isoform X4

      UniProtKB/TrEMBL
      F7ADF9, H9FUU9, H9FUV1
      Conserved Domains (8) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:262 → 326
      IGc2; Immunoglobulin C-2 Type
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:739 → 818
      FN3; Fibronectin type 3 domain
      cd00063
      Location:539 → 628
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:341 → 427
      I-set; Immunoglobulin I-set domain
      pfam06583
      Location:1158 → 1461
      Neogenin_C; Neogenin C-terminus
      pfam13895
      Location:157 → 239
      Ig_2; Immunoglobulin domain

    2. XM_015142627.2 → XP_014998113.1  neogenin isoform X1

      UniProtKB/TrEMBL
      F7ADF9, H9FUV1
      Conserved Domains (8) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:262 → 326
      IGc2; Immunoglobulin C-2 Type
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:759 → 838
      FN3; Fibronectin type 3 domain
      cd00063
      Location:559 → 648
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:341 → 427
      I-set; Immunoglobulin I-set domain
      pfam06583
      Location:1178 → 1481
      Neogenin_C; Neogenin C-terminus
      pfam13895
      Location:157 → 239
      Ig_2; Immunoglobulin domain

    3. XM_015142632.2 → XP_014998118.1  neogenin isoform X7

      UniProtKB/TrEMBL
      F7ADF9, H9FUV1
      Conserved Domains (8) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:262 → 326
      IGc2; Immunoglobulin C-2 Type
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:759 → 838
      FN3; Fibronectin type 3 domain
      cd00063
      Location:559 → 648
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:341 → 427
      I-set; Immunoglobulin I-set domain
      pfam06583
      Location:1178 → 1428
      Neogenin_C; Neogenin C-terminus
      pfam13895
      Location:157 → 239
      Ig_2; Immunoglobulin domain

    4. XM_015142635.2 → XP_014998121.1  neogenin isoform X9

      UniProtKB/TrEMBL
      F7ADF9, H9FUV1
      Conserved Domains (8) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:262 → 326
      IGc2; Immunoglobulin C-2 Type
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:759 → 838
      FN3; Fibronectin type 3 domain
      cd00063
      Location:559 → 648
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:341 → 427
      I-set; Immunoglobulin I-set domain
      pfam06583
      Location:1178 → 1397
      Neogenin_C; Neogenin C-terminus
      pfam13895
      Location:157 → 239
      Ig_2; Immunoglobulin domain

    5. XM_015142628.2 → XP_014998114.1  neogenin isoform X2

      UniProtKB/TrEMBL
      F7ADF9, H9FUV1
      Conserved Domains (8) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:262 → 326
      IGc2; Immunoglobulin C-2 Type
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:759 → 838
      FN3; Fibronectin type 3 domain
      cd00063
      Location:559 → 648
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:341 → 427
      I-set; Immunoglobulin I-set domain
      pfam06583
      Location:1167 → 1470
      Neogenin_C; Neogenin C-terminus
      pfam13895
      Location:157 → 239
      Ig_2; Immunoglobulin domain

    6. XM_028850315.1 → XP_028706148.1  neogenin isoform X6

      UniProtKB/TrEMBL
      F7ADF9, H9FUV1
      Conserved Domains (7) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:759 → 838
      FN3; Fibronectin type 3 domain
      cd00063
      Location:559 → 648
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam06583
      Location:1144 → 1447
      Neogenin_C; Neogenin C-terminus
      pfam00041
      Location:656 → 739
      fn3; Fibronectin type III domain
      pfam07679
      Location:250 → 337
      I-set; Immunoglobulin I-set domain

    7. XM_015142629.2 → XP_014998115.1  neogenin isoform X3

      UniProtKB/TrEMBL
      F6X4J3, F7ADF9, H9FUV1
      Related
      ENSMMUP00000012529.4, ENSMMUT00000013374.4
      Conserved Domains (8) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:262 → 326
      IGc2; Immunoglobulin C-2 Type
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:759 → 838
      FN3; Fibronectin type 3 domain
      cd00063
      Location:559 → 648
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:341 → 427
      I-set; Immunoglobulin I-set domain
      pfam06583
      Location:1162 → 1465
      Neogenin_C; Neogenin C-terminus
      pfam13895
      Location:157 → 239
      Ig_2; Immunoglobulin domain

    8. XM_015142631.2 → XP_014998117.1  neogenin isoform X5

      UniProtKB/TrEMBL
      F7ADF9, F7GQ62, H9FUV1
      Related
      ENSMMUP00000033443.3, ENSMMUT00000040374.3
      Conserved Domains (8) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:262 → 326
      IGc2; Immunoglobulin C-2 Type
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:759 → 838
      FN3; Fibronectin type 3 domain
      cd00063
      Location:559 → 648
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:341 → 427
      I-set; Immunoglobulin I-set domain
      pfam06583
      Location:1151 → 1454
      Neogenin_C; Neogenin C-terminus
      pfam13895
      Location:157 → 239
      Ig_2; Immunoglobulin domain

    9. XM_015142634.2 → XP_014998120.1  neogenin isoform X8

      UniProtKB/TrEMBL
      F7ADF9, H9FUV1
      Conserved Domains (8) summary
      cd05722
      Location:54 → 148
      Ig1_Neogenin; First immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00408
      Location:262 → 326
      IGc2; Immunoglobulin C-2 Type
      cd05723
      Location:357 → 427
      Ig4_Neogenin; Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins
      smart00060
      Location:739 → 818
      FN3; Fibronectin type 3 domain
      cd00063
      Location:539 → 628
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam07679
      Location:341 → 427
      I-set; Immunoglobulin I-set domain
      pfam06583
      Location:1158 → 1408
      Neogenin_C; Neogenin C-terminus
      pfam13895
      Location:157 → 239
      Ig_2; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.