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    ZSCAN2 zinc finger and SCAN domain containing 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695673, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZSCAN2provided by VGNC
    Official Full Name
    zinc finger and SCAN domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:79298
    See related
    Ensembl:ENSMMUG00000022080
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZSCAN2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (63838187..63871630, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (62738878..62762138)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene neuromedin B Neighboring gene putative SCAN domain-containing protein SCAND2P Neighboring gene WD repeat domain 73 Neighboring gene MKI67 FHA domain-interacting nucleolar phosphoprotein pseudogene Neighboring gene uncharacterized LOC114679484

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and SCAN domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      63838187..63871630 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851281.1 → XP_028707114.1  zinc finger and SCAN domain-containing protein 2 isoform X5

      UniProtKB/TrEMBL
      H9EYL2
      Conserved Domains (1) summary
      pfam02023
      Location:72 → 134
      SCAN; SCAN domain

    2. XM_001086522.4 → XP_001086522.4  zinc finger and SCAN domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      F7GH11, F7HNY7
      Related
      ENSMMUP00000081026.1, ENSMMUT00000094318.1
      Conserved Domains (3) summary
      COG5048
      Location:220 → 600
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:364 → 384
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl02605
      Location:70 → 134
      SCAN; SCAN oligomerization domain

    3. XM_002804927.3 → XP_002804973.3  zinc finger and SCAN domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      F7GH11, F7HNY7
      Conserved Domains (3) summary
      COG5048
      Location:220 → 600
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:364 → 384
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl02605
      Location:70 → 134
      SCAN; SCAN oligomerization domain

    4. XM_028851280.1 → XP_028707113.1  zinc finger and SCAN domain-containing protein 2 isoform X4

      UniProtKB/TrEMBL
      H9EYL2
      Conserved Domains (1) summary
      pfam02023
      Location:72 → 134
      SCAN; SCAN domain

    5. XM_028851277.1 → XP_028707110.1  zinc finger and SCAN domain-containing protein 2 isoform X2

      Conserved Domains (1) summary
      pfam02023
      Location:72 → 134
      SCAN; SCAN domain

    6. XM_028851279.1 → XP_028707112.1  zinc finger and SCAN domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      H9EYL2
      Conserved Domains (1) summary
      pfam02023
      Location:72 → 134
      SCAN; SCAN domain

    7. XM_028851278.1 → XP_028707111.1  zinc finger and SCAN domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      H9EYL2
      Conserved Domains (1) summary
      pfam02023
      Location:72 → 134
      SCAN; SCAN domain
    Nucleotide Protein
    Heading Accession and Version

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