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    LOC698743 FSHD region gene 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698743, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC698743
    Gene description
    FSHD region gene 1
    See related
    Ensembl:ENSMMUG00000047496
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FRG1
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    Genomic context

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    See LOC698743 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) Unplaced Scaffold NW_021161737.1 (32942..55583, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (190386309..190408953)

    NW_021161737.1Genomic Context describing neighboring genes Neighboring gene tubulin beta-8 chain-like Neighboring gene double homeobox protein 4C-like Neighboring gene uncharacterized LOC114675963

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in striated muscle dense body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein FRG1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261228.1 → NP_001248157.1  protein FRG1

      See identical proteins and their annotated locations for NP_001248157.1

      Status: PROVISIONAL

      Source sequence(s)
      JU472800
      UniProtKB/TrEMBL
      A0A1D5QNY3, F7E851
      Related
      ENSMMUP00000049759.2, ENSMMUT00000056150.2
      Conserved Domains (1) summary
      pfam06229
      Location:67 → 256
      FRG1; FRG1-like domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NW_021161737.1 Reference Mmul_10 Primary Assembly

      Range
      32942..55583 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028842945.1 → XP_028698778.1  protein FRG1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QNY3
      Conserved Domains (1) summary
      pfam06229
      Location:4 → 193
      FRG1; FRG1-like domain
    Nucleotide Protein
    Heading Accession and Version

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