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    ABCD4 ATP binding cassette subfamily D member 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699380, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ABCD4provided by VGNC
    Official Full Name
    ATP binding cassette subfamily D member 4provided by VGNC
    Primary source
    VGNC:VGNC:69580
    See related
    Ensembl:ENSMMUG00000004041
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ABCD4 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (136396011..136417448, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (136653553..136668929, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene lin-52 DREAM MuvB core complex component Neighboring gene 28S ribosomal protein S36, mitochondrial pseudogene Neighboring gene visual system homeobox 2 Neighboring gene vertebrae development associated Neighboring gene 40S ribosomal protein S2 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables long-chain fatty acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in long-chain fatty acid import into peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peroxisome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-binding cassette sub-family D member 4
    Names
    ATP-binding cassette, sub-family D (ALD), member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      136396011..136417448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851681.1 → XP_028707514.1  ATP-binding cassette sub-family D member 4 isoform X13

      Conserved Domains (3) summary
      cd03223
      Location:282 → 502
      ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
      TIGR02868
      Location:177 → 466
      CydC; thiol reductant ABC exporter, CydC subunit
      cl00549
      Location:16 → 95
      ABC_membrane; ABC transporter transmembrane region

    2. XM_028851670.1 → XP_028707503.1  ATP-binding cassette sub-family D member 4 isoform X3

      UniProtKB/TrEMBL
      G7MYS8
      Related
      ENSMMUP00000071716.1, ENSMMUT00000099927.1
      Conserved Domains (1) summary
      COG4178
      Location:106 → 572
      YddA; ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]

    3. XM_028851675.1 → XP_028707508.1  ATP-binding cassette sub-family D member 4 isoform X8

      UniProtKB/TrEMBL
      G7MYS8
      Conserved Domains (3) summary
      cd03223
      Location:306 → 526
      ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
      COG4178
      Location:143 → 528
      YddA; ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
      cl00549
      Location:16 → 213
      ABC_membrane; ABC transporter transmembrane region

    4. XM_028851672.1 → XP_028707505.1  ATP-binding cassette sub-family D member 4 isoform X5

      UniProtKB/TrEMBL
      G7MYS8
      Related
      ENSMMUP00000074416.1, ENSMMUT00000097613.1
      Conserved Domains (1) summary
      COG4178
      Location:17 → 558
      YddA; ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]

    5. XM_028851671.1 → XP_028707504.1  ATP-binding cassette sub-family D member 4 isoform X4

      UniProtKB/TrEMBL
      G7MYS8
      Conserved Domains (1) summary
      COG4178
      Location:17 → 567
      YddA; ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]

    6. XM_028851674.1 → XP_028707507.1  ATP-binding cassette sub-family D member 4 isoform X7

      UniProtKB/TrEMBL
      F6ZRB5
      Related
      ENSMMUP00000077863.1, ENSMMUT00000091646.1
      Conserved Domains (3) summary
      TIGR02204
      Location:282 → 445
      MsbA_rel; ABC transporter, permease/ATP-binding protein
      cd03223
      Location:387 → 538
      ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
      pfam06472
      Location:16 → 294
      ABC_membrane_2; ABC transporter transmembrane region 2

    7. XM_028851669.1 → XP_028707502.1  ATP-binding cassette sub-family D member 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZCW6, G7MYS8
      Related
      ENSMMUP00000062478.1, ENSMMUT00000095479.1
      Conserved Domains (2) summary
      COG4178
      Location:17 → 600
      YddA; ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
      pfam06472
      Location:16 → 294
      ABC_membrane_2; ABC transporter transmembrane region 2

    8. XM_028851673.1 → XP_028707506.1  ATP-binding cassette sub-family D member 4 isoform X6

      UniProtKB/TrEMBL
      F6ZRB5
      Conserved Domains (3) summary
      TIGR01194
      Location:271 → 453
      cyc_pep_trnsptr; cyclic peptide transporter
      cd03223
      Location:387 → 547
      ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
      pfam06472
      Location:16 → 294
      ABC_membrane_2; ABC transporter transmembrane region 2

    9. XM_028851668.1 → XP_028707501.1  ATP-binding cassette sub-family D member 4 isoform X1

      UniProtKB/TrEMBL
      G7MYS8
      Conserved Domains (2) summary
      COG4178
      Location:17 → 609
      YddA; ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
      pfam06472
      Location:16 → 294
      ABC_membrane_2; ABC transporter transmembrane region 2

    10. XM_028851679.1 → XP_028707512.1  ATP-binding cassette sub-family D member 4 isoform X11

      UniProtKB/TrEMBL
      G7MYS8
      Conserved Domains (1) summary
      COG4178
      Location:19 → 513
      YddA; ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]

    11. XM_028851677.1 → XP_028707510.1  ATP-binding cassette sub-family D member 4 isoform X10

      UniProtKB/TrEMBL
      G7MYS8
      Conserved Domains (1) summary
      COG4178
      Location:19 → 522
      YddA; ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]

    12. XM_028851682.1 → XP_028707515.1  ATP-binding cassette sub-family D member 4 isoform X14

      Conserved Domains (2) summary
      cd03223
      Location:124 → 335
      ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
      COG1132
      Location:1 → 321
      MdlB; ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]

    13. XM_028851680.1 → XP_028707513.1  ATP-binding cassette sub-family D member 4 isoform X12

      UniProtKB/TrEMBL
      G7MYS8
      Conserved Domains (3) summary
      TIGR01194
      Location:271 → 453
      cyc_pep_trnsptr; cyclic peptide transporter
      pfam06472
      Location:16 → 294
      ABC_membrane_2; ABC transporter transmembrane region 2
      cl25403
      Location:387 → 490
      ABC_ATPase; ATP-binding cassette transporter nucleotide-binding domain

    14. XM_028851676.1 → XP_028707509.1  ATP-binding cassette sub-family D member 4 isoform X9

      UniProtKB/TrEMBL
      G7MYS8
      Conserved Domains (3) summary
      COG2274
      Location:275 → 525
      SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
      pfam06472
      Location:16 → 294
      ABC_membrane_2; ABC transporter transmembrane region 2
      cl25403
      Location:387 → 490
      ABC_ATPase; ATP-binding cassette transporter nucleotide-binding domain

    RNA

    1. XR_003731638.1 RNA Sequence

      Related
      ENSMMUT00000089856.1

    2. XR_003731639.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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