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    SETD9 SET domain containing 9 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708019, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SETD9provided by VGNC
    Official Full Name
    SET domain containing 9provided by VGNC
    Primary source
    VGNC:VGNC:77322
    Locus tag
    EGK_16503
    See related
    Ensembl:ENSMMUG00000030085
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C5orf35
    Orthologs
    human mouse all
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    Genomic context

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    See SETD9 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (55232709..55270521)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (57888943..57926620)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678790 Neighboring gene uncharacterized LOC114678791 Neighboring gene mitogen-activated protein kinase kinase kinase 1 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC106998774 Neighboring gene MIER family member 3 Neighboring gene U2 small nuclear ribonucleoprotein B'' pseudogene Neighboring gene MORF4 family-associated protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SET domain-containing protein 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194171.2 → NP_001181100.1  SET domain-containing protein 9

      See identical proteins and their annotated locations for NP_001181100.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000392
      UniProtKB/TrEMBL
      A0A1D5R3F5, A0A8J8XZK7, F7H9J6, G7MTS3
      Related
      ENSMMUP00000054841.2, ENSMMUT00000064973.2
      Conserved Domains (1) summary
      pfam00856
      Location:261 → 294
      SET; SET domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      55232709..55270521
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849231.1 → XP_028705064.1  SET domain-containing protein 9 isoform X4

      Conserved Domains (1) summary
      cd10537
      Location:43 → 220
      SET_SETD9; SET domain found in SET domain-containing protein 9 (SETD9) and similar proteins

    2. XM_015140051.2 → XP_014995537.1  SET domain-containing protein 9 isoform X1

    3. XM_015140052.2 → XP_014995538.1  SET domain-containing protein 9 isoform X2

    4. XM_028849232.1 → XP_028705065.1  SET domain-containing protein 9 isoform X4

      Conserved Domains (1) summary
      cd10537
      Location:43 → 220
      SET_SETD9; SET domain found in SET domain-containing protein 9 (SETD9) and similar proteins

    5. XM_028849233.1 → XP_028705066.1  SET domain-containing protein 9 isoform X4

      Conserved Domains (1) summary
      cd10537
      Location:43 → 220
      SET_SETD9; SET domain found in SET domain-containing protein 9 (SETD9) and similar proteins

    6. XM_015140053.2 → XP_014995539.1  SET domain-containing protein 9 isoform X3

      Conserved Domains (1) summary
      pfam00856
      Location:229 → 262
      SET; SET domain
    Nucleotide Protein
    Heading Accession and Version

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