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    QKI QKI, KH domain containing RNA binding [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712600, updated on 17-Aug-2024

    Summary

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    Official Symbol
    QKIprovided by VGNC
    Official Full Name
    QKI, KH domain containing RNA bindingprovided by VGNC
    Primary source
    VGNC:VGNC:99431
    See related
    Ensembl:ENSMMUG00000000428
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See QKI in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (7180761..7348059, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (164555088..164684088)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677448 Neighboring gene uncharacterized LOC106998188 Neighboring gene uncharacterized LOC114677450 Neighboring gene 60S ribosomal protein L37a-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein quaking

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      7180761..7348059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028846996.1 → XP_028702829.1  protein quaking isoform X3

      UniProtKB/TrEMBL
      F7ACH8, G7MR11
      Related
      ENSMMUP00000000579.4, ENSMMUT00000000628.4
      Conserved Domains (4) summary
      PRK14950
      Location:195 → 305
      PRK14950; DNA polymerase III subunits gamma and tau; Provisional
      pfam16544
      Location:10 → 66
      STAR_dimer; Homodimerization region of STAR domain protein
      pfam16551
      Location:304 → 333
      Quaking_NLS; Putative nuclear localization signal of quaking
      cd22465
      Location:81 → 183
      KH-I_Hqk; type I K homology (KH) RNA-binding domain found in protein quaking (Hqk) and similar proteins

    2. XM_028846994.1 → XP_028702827.1  protein quaking isoform X1

      UniProtKB/TrEMBL
      G7MR11
      Conserved Domains (4) summary
      PHA03247
      Location:211 → 314
      PHA03247; large tegument protein UL36; Provisional
      pfam16544
      Location:10 → 66
      STAR_dimer; Homodimerization region of STAR domain protein
      pfam16551
      Location:312 → 341
      Quaking_NLS; Putative nuclear localization signal of quaking
      cd22465
      Location:81 → 183
      KH-I_Hqk; type I K homology (KH) RNA-binding domain found in protein quaking (Hqk) and similar proteins

    3. XM_028846995.1 → XP_028702828.1  protein quaking isoform X2

      UniProtKB/TrEMBL
      G7MR11
      Conserved Domains (4) summary
      PHA03247
      Location:212 → 313
      PHA03247; large tegument protein UL36; Provisional
      pfam16544
      Location:10 → 66
      STAR_dimer; Homodimerization region of STAR domain protein
      pfam16551
      Location:311 → 340
      Quaking_NLS; Putative nuclear localization signal of quaking
      cd22465
      Location:81 → 183
      KH-I_Hqk; type I K homology (KH) RNA-binding domain found in protein quaking (Hqk) and similar proteins

    4. XM_028846999.1 → XP_028702832.1  protein quaking isoform X6

      UniProtKB/TrEMBL
      G7MR11
      Conserved Domains (3) summary
      PHA03247
      Location:187 → 290
      PHA03247; large tegument protein UL36; Provisional
      pfam16551
      Location:288 → 317
      Quaking_NLS; Putative nuclear localization signal of quaking
      cd22465
      Location:57 → 159
      KH-I_Hqk; type I K homology (KH) RNA-binding domain found in protein quaking (Hqk) and similar proteins

    5. XM_028846998.1 → XP_028702831.1  protein quaking isoform X5

      UniProtKB/TrEMBL
      G7MR11, I2CYY6
      Related
      ENSMMUP00000000576.4, ENSMMUT00000000625.4
      Conserved Domains (3) summary
      PRK14951
      Location:210 → 281
      PRK14951; DNA polymerase III subunits gamma and tau; Provisional
      pfam16544
      Location:10 → 66
      STAR_dimer; Homodimerization region of STAR domain protein
      cd22465
      Location:81 → 183
      KH-I_Hqk; type I K homology (KH) RNA-binding domain found in protein quaking (Hqk) and similar proteins

    6. XM_028846997.1 → XP_028702830.1  protein quaking isoform X4

      UniProtKB/TrEMBL
      G7MR11, I2CYY5
      Related
      ENSMMUP00000000580.4, ENSMMUT00000000629.4
      Conserved Domains (3) summary
      PRK14951
      Location:210 → 281
      PRK14951; DNA polymerase III subunits gamma and tau; Provisional
      pfam16544
      Location:10 → 66
      STAR_dimer; Homodimerization region of STAR domain protein
      cd22465
      Location:81 → 183
      KH-I_Hqk; type I K homology (KH) RNA-binding domain found in protein quaking (Hqk) and similar proteins

    RNA

    1. XR_003728734.1 RNA Sequence

    2. XR_003728733.1 RNA Sequence

    3. XR_003728735.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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