U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LRRC56 leucine rich repeat containing 56 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698952, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    LRRC56provided by VGNC
    Official Full Name
    leucine rich repeat containing 56provided by VGNC
    Primary source
    VGNC:VGNC:74356
    See related
    Ensembl:ENSMMUG00000021661
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LRRC56 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (590855..607036)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (379344..395524)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene ribonuclease inhibitor Neighboring gene uncharacterized LOC106993152 Neighboring gene HRas proto-oncogene, GTPase Neighboring gene lamin tail domain containing 2 Neighboring gene Ras association domain family member 7 Neighboring gene uncharacterized LOC114672193 Neighboring gene microRNA mir-210

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    leucine-rich repeat-containing protein 56

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      590855..607036
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832961.1 → XP_028688794.1  leucine-rich repeat-containing protein 56 isoform X1

      UniProtKB/TrEMBL
      F7F5I8, G7NBD0
      Conserved Domains (2) summary
      sd00033
      Location:95 → 117
      LRR_RI; leucine-rich repeat [structural motif]
      pfam14580
      Location:97 → 230
      LRR_9; Leucine-rich repeat

    2. XM_028832962.1 → XP_028688795.1  leucine-rich repeat-containing protein 56 isoform X1

      UniProtKB/TrEMBL
      F7F5I8, G7NBD0
      Conserved Domains (2) summary
      sd00033
      Location:95 → 117
      LRR_RI; leucine-rich repeat [structural motif]
      pfam14580
      Location:97 → 230
      LRR_9; Leucine-rich repeat

    3. XM_001085909.4 → XP_001085909.2  leucine-rich repeat-containing protein 56 isoform X1

      UniProtKB/TrEMBL
      F7F5I8, G7NBD0
      Related
      ENSMMUP00000028525.3, ENSMMUT00000030483.4
      Conserved Domains (2) summary
      sd00033
      Location:95 → 117
      LRR_RI; leucine-rich repeat [structural motif]
      pfam14580
      Location:97 → 230
      LRR_9; Leucine-rich repeat

    4. XM_028832965.1 → XP_028688798.1  leucine-rich repeat-containing protein 56 isoform X3

      UniProtKB/TrEMBL
      G7NBD0
      Conserved Domains (2) summary
      sd00033
      Location:95 → 117
      LRR_RI; leucine-rich repeat [structural motif]
      pfam14580
      Location:97 → 230
      LRR_9; Leucine-rich repeat

    5. XM_028832964.1 → XP_028688797.1  leucine-rich repeat-containing protein 56 isoform X2

      UniProtKB/TrEMBL
      G7NBD0
      Conserved Domains (3) summary
      COG4886
      Location:130 → 199
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:95 → 117
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:117 → 156
      LRR_4; Leucine Rich repeats (2 copies)

    6. XM_028832963.1 → XP_028688796.1  leucine-rich repeat-containing protein 56 isoform X1

      UniProtKB/TrEMBL
      F7F5I8, G7NBD0
      Conserved Domains (2) summary
      sd00033
      Location:95 → 117
      LRR_RI; leucine-rich repeat [structural motif]
      pfam14580
      Location:97 → 230
      LRR_9; Leucine-rich repeat
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials