U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RAD23B RAD23 homolog B, nucleotide excision repair protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711328, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RAD23Bprovided by VGNC
    Official Full Name
    RAD23 homolog B, nucleotide excision repair proteinprovided by VGNC
    Primary source
    VGNC:VGNC:76644
    See related
    Ensembl:ENSMMUG00000014944
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RAD23B in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (35558133..35605063, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (32222195..32269312, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene KLF transcription factor 4 Neighboring gene uncharacterized LOC114672746 Neighboring gene importin subunit alpha-1 pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables damaged DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proteasome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nucleotide-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    UV excision repair protein RAD23 homolog B

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261788.1 → NP_001248717.1  UV excision repair protein RAD23 homolog B

      See identical proteins and their annotated locations for NP_001248717.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044611
      UniProtKB/TrEMBL
      F6W0K0, F7HIB3, H9YX93
      Related
      ENSMMUP00000039627.3, ENSMMUT00000026714.4
      Conserved Domains (1) summary
      TIGR00601
      Location:1 → 407
      rad23; UV excision repair protein Rad23

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      35558133..35605063 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834360.1 → XP_028690193.1  UV excision repair protein RAD23 homolog B isoform X1

      UniProtKB/TrEMBL
      F6W0K0, F7HIB3, H9YX93
      Conserved Domains (1) summary
      TIGR00601
      Location:1 → 407
      rad23; UV excision repair protein Rad23

    2. XM_015117087.2 → XP_014972573.1  UV excision repair protein RAD23 homolog B isoform X2

      UniProtKB/TrEMBL
      G7NEK8
      Conserved Domains (6) summary
      cd14377
      Location:168 → 207
      UBA1_Rad23; UBA1 domain of Rad23 proteins found in metazoa
      cd14428
      Location:344 → 388
      UBA2_HR23B; UBA2 domain of UV excision repair protein RAD23 homolog B (HR23B) found in vertebrates
      TIGR00601
      Location:2 → 386
      rad23; UV excision repair protein Rad23
      pfam09280
      Location:255 → 310
      XPC-binding; XPC-binding domain
      pfam12238
      Location:106 → 149
      MSA-2c; Merozoite surface antigen 2c
      cl00155
      Location:2 → 57
      UBQ; Ubiquitin-like proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.