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    B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715317, updated on 17-Aug-2024

    Summary

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    Official Symbol
    B4GALNT1provided by VGNC
    Official Full Name
    beta-1,4-N-acetyl-galactosaminyltransferase 1provided by VGNC
    Primary source
    VGNC:VGNC:70164
    Locus tag
    EGK_03848
    See related
    Ensembl:ENSMMUG00000001182
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See B4GALNT1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (57200642..57210300, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (56423108..56430513, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000898 Neighboring gene deltex E3 ubiquitin ligase 3 Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene solute carrier family 26 member 10 Neighboring gene nucleolar protein 56-like Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hexosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ganglioside biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-1,4 N-acetylgalactosaminyltransferase 1
    Names
    Beta-1,4 N-acetylgalactosaminyltransferase 1
    XP_001116263.2
    XP_001116271.1
    XP_015007617.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      57200642..57210300 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001116271.4 → XP_001116271.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X2

      See identical proteins and their annotated locations for XP_001116271.1

      UniProtKB/TrEMBL
      A0A5S6R739, A0A8J8Y994, F6R9K4, G7N7G9, H9F7B6
      Conserved Domains (1) summary
      pfam00535
      Location:280 → 429
      Glycos_transf_2; Glycosyl transferase family 2

    2. XM_015152131.2 → XP_015007617.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X2

      UniProtKB/TrEMBL
      A0A5S6R739, A0A8J8Y994, F6R9K4, G7N7G9, H9F7B6
      Related
      ENSMMUP00000001579.4, ENSMMUT00000001675.4
      Conserved Domains (1) summary
      pfam00535
      Location:280 → 429
      Glycos_transf_2; Glycosyl transferase family 2

    3. XM_001116263.4 → XP_001116263.2  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZP74, H9F7B6
      Related
      ENSMMUP00000067419.1, ENSMMUT00000109056.1
      Conserved Domains (2) summary
      COG0463
      Location:355 → 453
      WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
      pfam00535
      Location:357 → 506
      Glycos_transf_2; Glycosyl transferase family 2
    Nucleotide Protein
    Heading Accession and Version

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