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    MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719423, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MDGA1provided by VGNC
    Official Full Name
    MAM domain containing glycosylphosphatidylinositol anchor 1provided by VGNC
    Primary source
    VGNC:VGNC:74535
    See related
    Ensembl:ENSMMUG00000003725
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MDGA1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (131718327..131782605)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (38596240..38660537, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677615 Neighboring gene zinc finger AN1-type containing 3 Neighboring gene U1 spliceosomal RNA Neighboring gene coiled-coil domain containing 167 Neighboring gene cap methyltransferase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables axon guidance receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synapse organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MAM domain-containing glycosylphosphatidylinositol anchor protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      131718327..131782605
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015136284.2 → XP_014991770.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X2

      UniProtKB/TrEMBL
      F6S264, I2CVH3
      Related
      ENSMMUP00000004967.4, ENSMMUT00000005273.4
      Conserved Domains (5) summary
      smart00410
      Location:248 → 326
      IG_like; Immunoglobulin like
      pfam00629
      Location:753 → 917
      MAM; MAM domain, meprin/A5/mu
      pfam13927
      Location:43 → 112
      Ig_3; Immunoglobulin domain
      cd00096
      Location:56 → 60
      Ig; Ig strand B [structural motif]
      cl11960
      Location:334 → 418
      Ig; Immunoglobulin domain

    2. XM_028847610.1 → XP_028703443.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X3

      Conserved Domains (4) summary
      cd00063
      Location:457 → 540
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00629
      Location:553 → 717
      MAM; MAM domain, meprin/A5/mu
      pfam07679
      Location:133 → 218
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:43 → 112
      Ig_3; Immunoglobulin domain

    3. XM_015136283.2 → XP_014991769.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X1

      UniProtKB/TrEMBL
      I2CVH3
      Conserved Domains (5) summary
      smart00410
      Location:248 → 326
      IG_like; Immunoglobulin like
      pfam00629
      Location:753 → 917
      MAM; MAM domain, meprin/A5/mu
      pfam13927
      Location:43 → 112
      Ig_3; Immunoglobulin domain
      cd00096
      Location:56 → 60
      Ig; Ig strand B [structural motif]
      cl11960
      Location:334 → 418
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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