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    TNPO3 transportin 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700852, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TNPO3provided by VGNC
    Official Full Name
    transportin 3provided by VGNC
    Primary source
    VGNC:VGNC:79063
    Locus tag
    EGK_14121
    See related
    Ensembl:ENSMMUG00000004311
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TNPO3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (155204771..155305510, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (155002474..155102599, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene filamin-C Neighboring gene interferon regulatory factor 5 Neighboring gene ornithine decarboxylase pseudogene Neighboring gene triosephosphate isomerase pseudogene Neighboring gene small nucleolar RNA U13 Neighboring gene cytochrome c-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transportin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266048.2 → NP_001252977.1  transportin-3

      See identical proteins and their annotated locations for NP_001252977.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044436
      UniProtKB/TrEMBL
      A0A1D5Q969, A0A8J8YFD8, F6ZKM5, G7MMC0
      Related
      ENSMMUP00000044587.1, ENSMMUT00000069905.2
      Conserved Domains (2) summary
      smart00913
      Location:33 → 96
      IBN_N; Importin-beta N-terminal domain
      pfam08389
      Location:121 → 248
      Xpo1; Exportin 1-like protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      155204771..155305510 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134812.2 → XP_014990298.1  transportin-3 isoform X1

      UniProtKB/TrEMBL
      F6ZKN5
      Conserved Domains (1) summary
      pfam08389
      Location:55 → 182
      Xpo1; Exportin 1-like protein

    2. XM_015134813.2 → XP_014990299.1  transportin-3 isoform X1

      UniProtKB/TrEMBL
      F6ZKN5
      Conserved Domains (1) summary
      pfam08389
      Location:55 → 182
      Xpo1; Exportin 1-like protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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