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    SPAG6 sperm associated antigen 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704807, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SPAG6provided by VGNC
    Official Full Name
    sperm associated antigen 6provided by VGNC
    Primary source
    VGNC:VGNC:77851
    See related
    Ensembl:ENSMMUG00000000882
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SPAG6 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (23376831..23442912)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (22531702..22597811)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 3 Neighboring gene BMI1 proto-oncogene, polycomb ring finger Neighboring gene phosphatidylinositol-5-phosphate 4-kinase type 2 alpha Neighboring gene uncharacterized LOC107000072

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in epithelial cilium movement involved in extracellular fluid movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in filopodium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron projection extension IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sperm axoneme assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in acrosomal vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sperm principal piece IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sperm-associated antigen 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      23376831..23442912
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001097347.4 → XP_001097347.1  sperm-associated antigen 6 isoform X1

      See identical proteins and their annotated locations for XP_001097347.1

      UniProtKB/TrEMBL
      F7GZI2
      Related
      ENSMMUP00000036158.2, ENSMMUT00000043146.3
      Conserved Domains (3) summary
      COG5064
      Location:112 → 423
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      sd00044
      Location:289 → 325
      HEAT; HEAT repeat [structural motif]
      sd00043
      Location:120 → 152
      ARM; armadillo repeat [structural motif]

    2. XM_001097245.4 → XP_001097245.1  sperm-associated antigen 6 isoform X4

      See identical proteins and their annotated locations for XP_001097245.1

      Conserved Domains (4) summary
      cd00020
      Location:77 → 195
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      pfam13646
      Location:130 → 234
      HEAT_2; HEAT repeats
      sd00044
      Location:289 → 325
      HEAT; HEAT repeat [structural motif]
      sd00043
      Location:120 → 152
      ARM; armadillo repeat [structural motif]

    3. XM_015146606.2 → XP_015002092.1  sperm-associated antigen 6 isoform X3

      Conserved Domains (4) summary
      cd00020
      Location:77 → 195
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      pfam13646
      Location:130 → 234
      HEAT_2; HEAT repeats
      sd00044
      Location:289 → 325
      HEAT; HEAT repeat [structural motif]
      sd00043
      Location:120 → 152
      ARM; armadillo repeat [structural motif]

    4. XM_015146603.2 → XP_015002089.1  sperm-associated antigen 6 isoform X2

      Conserved Domains (4) summary
      cd00020
      Location:55 → 173
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      pfam13646
      Location:108 → 212
      HEAT_2; HEAT repeats
      sd00044
      Location:267 → 303
      HEAT; HEAT repeat [structural motif]
      sd00043
      Location:98 → 130
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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