U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DENND6B DENN domain containing 6B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715877, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    DENND6Bprovided by VGNC
    Official Full Name
    DENN domain containing 6Bprovided by VGNC
    Primary source
    VGNC:VGNC:71825
    See related
    Ensembl:ENSMMUG00000008327
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FAM116B
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DENND6B in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (1154471..1172457)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (92342805..92360149, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene SET binding factor 1 Neighboring gene adrenomedullin 2 Neighboring gene protein phosphatase 6 regulatory subunit 2 Neighboring gene plexin B2 Neighboring gene uncharacterized LOC114670328 Neighboring gene mitogen-activated protein kinase 11

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein DENND6B
    Names
    family with sequence similarity 116, member B

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194565.2 → NP_001181494.2  protein DENND6B

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000021
      UniProtKB/TrEMBL
      A0A1D5Q6D4, H9FUH7
      Related
      ENSMMUP00000043600.2, ENSMMUT00000069788.2
      Conserved Domains (2) summary
      pfam08616
      Location:250 → 356
      SPA; Stabilization of polarity axis
      cl11519
      Location:151 → 311
      DENN; DENN (AEX-3) domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      1154471..1172457
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827384.1 → XP_028683217.1  protein DENND6B isoform X1

      UniProtKB/TrEMBL
      F7HTW3
      Related
      ENSMMUP00000010921.3, ENSMMUT00000011648.4
      Conserved Domains (3) summary
      PHA03247
      Location:384 → 632
      PHA03247; large tegument protein UL36; Provisional
      pfam08616
      Location:250 → 356
      SPA; Stabilization of polarity axis
      cl11519
      Location:151 → 311
      DENN; DENN (AEX-3) domain

    2. XM_028827386.1 → XP_028683219.1  protein DENND6B isoform X3

      UniProtKB/TrEMBL
      F7HTW3
      Conserved Domains (3) summary
      PHA03247
      Location:411 → 775
      PHA03247; large tegument protein UL36; Provisional
      pfam08616
      Location:250 → 356
      SPA; Stabilization of polarity axis
      cl11519
      Location:151 → 311
      DENN; DENN (AEX-3) domain

    3. XM_028827387.1 → XP_028683220.1  protein DENND6B isoform X4

      UniProtKB/TrEMBL
      F7HTW3
      Conserved Domains (3) summary
      PHA03307
      Location:375 → 739
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam08616
      Location:250 → 356
      SPA; Stabilization of polarity axis
      cl11519
      Location:151 → 311
      DENN; DENN (AEX-3) domain

    4. XM_015150593.2 → XP_015006079.2  protein DENND6B isoform X5

      UniProtKB/TrEMBL
      H9FUH7
      Conserved Domains (2) summary
      pfam08616
      Location:250 → 356
      SPA; Stabilization of polarity axis
      cl11519
      Location:151 → 311
      DENN; DENN (AEX-3) domain

    5. XM_028827385.1 → XP_028683218.1  protein DENND6B isoform X2

      UniProtKB/TrEMBL
      F7HTW3
      Conserved Domains (3) summary
      PHA03247
      Location:357 → 605
      PHA03247; large tegument protein UL36; Provisional
      pfam08616
      Location:223 → 329
      SPA; Stabilization of polarity axis
      cl11519
      Location:125 → 284
      DENN; DENN (AEX-3) domain

    6. XM_028827388.1 → XP_028683221.1  protein DENND6B isoform X6

      Conserved Domains (2) summary
      PHA03247
      Location:64 → 282
      PHA03247; large tegument protein UL36; Provisional
      PHA03307
      Location:116 → 473
      PHA03307; transcriptional regulator ICP4; Provisional

    7. XM_028827390.1 → XP_028683223.1  protein DENND6B isoform X8

      Conserved Domains (2) summary
      PHA03247
      Location:61 → 252
      PHA03247; large tegument protein UL36; Provisional
      PHA03307
      Location:31 → 439
      PHA03307; transcriptional regulator ICP4; Provisional

    8. XM_028827391.1 → XP_028683224.1  protein DENND6B isoform X9

      Conserved Domains (2) summary
      PHA03247
      Location:26 → 212
      PHA03247; large tegument protein UL36; Provisional
      PHA03307
      Location:32 → 396
      PHA03307; transcriptional regulator ICP4; Provisional

    9. XM_028827389.1 → XP_028683222.1  protein DENND6B isoform X7

      Conserved Domains (2) summary
      PHA03247
      Location:52 → 277
      PHA03247; large tegument protein UL36; Provisional
      PHA03307
      Location:104 → 461
      PHA03307; transcriptional regulator ICP4; Provisional

    RNA

    1. XR_003719778.1 RNA Sequence

    2. XR_003719779.1 RNA Sequence

    3. XR_001447839.2 RNA Sequence

    4. XR_003719780.1 RNA Sequence

      Related
      ENSMMUT00000066795.2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.