U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    THOC6 THO complex subunit 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700217, updated on 6-Oct-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    THOC6provided by VGNC
    Official Full Name
    THO complex subunit 6provided by VGNC
    Primary source
    VGNC:VGNC:79703
    Locus tag
    EGK_12414
    See related
    Ensembl:ENSMMUG00000007666
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See THOC6 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (3086813..3092216)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (3899922..3905321, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene claudin 6 Neighboring gene TNF receptor superfamily member 12A Neighboring gene host cell factor C1 regulator 1 Neighboring gene BICD family like cargo adaptor 2 Neighboring gene putative uncharacterized protein FLJ46214 Neighboring gene matrix metallopeptidase 25 Neighboring gene sialidase-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of THO complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription export complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    THO complex subunit 6; THO complex subunit 6 homolog
    Names
    THO complex 6 homolog
    WD repeat-containing protein 58

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257916.2 → NP_001244845.1  THO complex subunit 6

      See identical proteins and their annotated locations for NP_001244845.1

      Status: PROVISIONAL

      Source sequence(s)
      JU336369
      UniProtKB/TrEMBL
      A0A8J8YET4, F7DB82, G7NP61, H9YUR7
      Related
      ENSMMUP00000010074.3, ENSMMUT00000010738.4
      Conserved Domains (2) summary
      sd00039
      Location:27 → 74
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:27 → 285
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      3086813..3092216
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028840429.1 → XP_028696262.1  THO complex subunit 6 homolog isoform X1

      UniProtKB/TrEMBL
      H9YUR7
      Conserved Domains (2) summary
      sd00039
      Location:27 → 74
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:27 → 291
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials