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    PSMD6 proteasome 26S subunit, non-ATPase 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698601, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PSMD6provided by VGNC
    Official Full Name
    proteasome 26S subunit, non-ATPase 6provided by VGNC
    Primary source
    VGNC:VGNC:76454
    Locus tag
    EGK_11513
    See related
    Ensembl:ENSMMUG00000001509
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PSMD6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (120151951..120164755, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (78049395..78061875)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene THO complex subunit 7 Neighboring gene ataxin 7 Neighboring gene small nucleolar RNA U3 Neighboring gene prickle planar cell polarity protein 2 Neighboring gene thioredoxin-dependent peroxide reductase, mitochondrial-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome regulatory particle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    26S proteasome non-ATPase regulatory subunit 6
    Names
    proteasome (prosome, macropain) 26S subunit, non-ATPase, 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266757.1 → NP_001253686.1  26S proteasome non-ATPase regulatory subunit 6

      See identical proteins and their annotated locations for NP_001253686.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045711
      UniProtKB/TrEMBL
      A0A8J8YND6, F7H0I4, F7H0I6, G7MKY3
      Related
      ENSMMUP00000039563.3, ENSMMUT00000046530.3
      Conserved Domains (1) summary
      COG5187
      Location:15 → 382
      RPN7; 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      120151951..120164755 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130444.2 → XP_014985930.1  26S proteasome non-ATPase regulatory subunit 6 isoform X2

      UniProtKB/TrEMBL
      F7GFM2
      Conserved Domains (1) summary
      COG5187
      Location:1 → 333
      RPN7; 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones]

    2. XM_015130442.2 → XP_014985928.1  26S proteasome non-ATPase regulatory subunit 6 isoform X1

      Conserved Domains (1) summary
      COG5187
      Location:22 → 355
      RPN7; 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones]

    3. XM_015130443.2 → XP_014985929.1  26S proteasome non-ATPase regulatory subunit 6 isoform X2

      UniProtKB/TrEMBL
      F7GFM2
      Conserved Domains (1) summary
      COG5187
      Location:1 → 333
      RPN7; 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

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