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    USP21 ubiquitin specific peptidase 21 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719894, updated on 17-Aug-2024

    Summary

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    Official Symbol
    USP21provided by VGNC
    Official Full Name
    ubiquitin specific peptidase 21provided by VGNC
    Primary source
    VGNC:VGNC:78741
    Locus tag
    EGK_01528
    See related
    Ensembl:ENSMMUG00000022631
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See USP21 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (89786253..89792520, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (135884433..135890695)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 4 Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene protoporphyrinogen oxidase Neighboring gene ubiquitin-fold modifier conjugating enzyme 1 Neighboring gene death effector domain containing Neighboring gene nitrilase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin carboxyl-terminal hydrolase 21
    XP_014969236.1
    XP_014969239.1
    XP_014969242.1
    XP_014969245.1
    XP_028682608.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      89786253..89792520 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015113759.2 → XP_014969245.1  ubiquitin carboxyl-terminal hydrolase 21 isoform X3

      Conserved Domains (3) summary
      cd02674
      Location:29 → 447
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
      cl02553
      Location:26 → 144
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
      pfam00443
      Location:28 → 446
      UCH; Ubiquitin carboxyl-terminal hydrolase

    2. XM_015113750.2 → XP_014969236.1  ubiquitin carboxyl-terminal hydrolase 21 isoform X1

      UniProtKB/TrEMBL
      F6WTH2
      Related
      ENSMMUP00000038553.3, ENSMMUT00000045520.3
      Conserved Domains (1) summary
      pfam00443
      Location:212 → 630
      UCH; Ubiquitin carboxyl-terminal hydrolase

    3. XM_015113756.2 → XP_014969242.1  ubiquitin carboxyl-terminal hydrolase 21 isoform X2

      UniProtKB/TrEMBL
      A0A8J8YDY1, F6Z0F5, G7ME91, H9FSY1
      Conserved Domains (1) summary
      pfam00443
      Location:212 → 555
      UCH; Ubiquitin carboxyl-terminal hydrolase

    4. XM_028826775.1 → XP_028682608.1  ubiquitin carboxyl-terminal hydrolase 21 isoform X1

      UniProtKB/TrEMBL
      F6WTH2
      Conserved Domains (1) summary
      pfam00443
      Location:212 → 630
      UCH; Ubiquitin carboxyl-terminal hydrolase

    5. XM_015113753.2 → XP_014969239.1  ubiquitin carboxyl-terminal hydrolase 21 isoform X1

      UniProtKB/TrEMBL
      F6WTH2
      Conserved Domains (1) summary
      pfam00443
      Location:212 → 630
      UCH; Ubiquitin carboxyl-terminal hydrolase
    Nucleotide Protein
    Heading Accession and Version

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