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    ZNF518B zinc finger protein 518B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713122, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNF518Bprovided by VGNC
    Official Full Name
    zinc finger protein 518Bprovided by VGNC
    Primary source
    VGNC:VGNC:79802
    See related
    Ensembl:ENSMMUG00000017761
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF518B in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (9508830..9530167, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (9826078..9847381, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene ATPase family AAA domain-containing protein 3C-like Neighboring gene WD repeat domain 1 Neighboring gene 2-iminobutanoate/2-iminopropanoate deaminase pseudogene Neighboring gene cytokine dependent hematopoietic cell linker

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 518B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261812.1 → NP_001248741.1  zinc finger protein 518B

      See identical proteins and their annotated locations for NP_001248741.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048536
      UniProtKB/TrEMBL
      A0A8J8YSR8, G7MSK5, H9G141, H9ZEM9
      Conserved Domains (2) summary
      sd00017
      Location:137 → 157
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:176 → 197
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      9508830..9530167 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015137995.2 → XP_014993481.2  zinc finger protein 518B isoform X1

      UniProtKB/TrEMBL
      A0A8J8YSR8, F7EZ91, G7MSK5, H9ZEM9
      Conserved Domains (2) summary
      sd00017
      Location:137 → 157
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:176 → 197
      zf-H2C2_2; Zinc-finger double domain

    2. XM_015137998.2 → XP_014993484.2  zinc finger protein 518B isoform X1

      UniProtKB/TrEMBL
      A0A8J8YSR8, F7EZ91, G7MSK5, H9ZEM9
      Related
      ENSMMUP00000062898.1, ENSMMUT00000100075.1
      Conserved Domains (2) summary
      sd00017
      Location:137 → 157
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:176 → 197
      zf-H2C2_2; Zinc-finger double domain

    3. XM_028848130.1 → XP_028703963.1  zinc finger protein 518B isoform X1

      UniProtKB/TrEMBL
      A0A8J8YSR8, F7EZ91, G7MSK5, H9ZEM9
      Related
      ENSMMUP00000023359.3, ENSMMUT00000024962.4
      Conserved Domains (2) summary
      sd00017
      Location:137 → 157
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:176 → 197
      zf-H2C2_2; Zinc-finger double domain

    4. XM_015137999.2 → XP_014993485.2  zinc finger protein 518B isoform X1

      UniProtKB/TrEMBL
      A0A8J8YSR8, F7EZ91, G7MSK5, H9ZEM9
      Related
      ENSMMUP00000064985.1, ENSMMUT00000104751.1
      Conserved Domains (2) summary
      sd00017
      Location:137 → 157
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:176 → 197
      zf-H2C2_2; Zinc-finger double domain

    5. XM_015137997.2 → XP_014993483.2  zinc finger protein 518B isoform X1

      UniProtKB/TrEMBL
      A0A8J8YSR8, F7EZ91, G7MSK5, H9ZEM9
      Conserved Domains (2) summary
      sd00017
      Location:137 → 157
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:176 → 197
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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