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    ANKRD50 ankyrin repeat domain containing 50 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709327, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ANKRD50provided by VGNC
    Official Full Name
    ankyrin repeat domain containing 50provided by VGNC
    Primary source
    VGNC:VGNC:69734
    See related
    Ensembl:ENSMMUG00000006783
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ANKRD50 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (122452240..122497446, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (123748942..123793737, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-4 chain pseudogene Neighboring gene very-long-chain enoyl-CoA reductase pseudogene Neighboring gene survival of motor neuron-related-splicing factor 30 pseudogene Neighboring gene uncharacterized LOC114678176

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat domain-containing protein 50
    Names
    ankyrin repeat domain 50

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266441.1 → NP_001253370.1  ankyrin repeat domain-containing protein 50

      See identical proteins and their annotated locations for NP_001253370.1

      Status: PROVISIONAL

      Source sequence(s)
      JU321714
      UniProtKB/TrEMBL
      A0A1D5RC95, F7H1K0, G7MRY1, H9ESW1
      Related
      ENSMMUP00000008921.3, ENSMMUT00000009491.4
      Conserved Domains (7) summary
      cd00204
      Location:974 → 1097
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:983 → 1075
      Ank_2; Ankyrin repeats (3 copies)
      pfam13191
      Location:22 → 195
      AAA_16; AAA ATPase domain
      pfam13637
      Location:946 → 999
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:531 → 585
      Ank_5; Ankyrin repeats (many copies)
      pfam16592
      Location:221 → 352
      Cas9_REC; REC lobe of CRISPR-associated endonuclease Cas9
      sd00045
      Location:676 → 707
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      122452240..122497446 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015138966.2 → XP_014994452.1  ankyrin repeat domain-containing protein 50 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RC95, F7H1K0, G7MRY1, H9ESW1
      Conserved Domains (7) summary
      cd00204
      Location:974 → 1097
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:983 → 1075
      Ank_2; Ankyrin repeats (3 copies)
      pfam13191
      Location:22 → 195
      AAA_16; AAA ATPase domain
      pfam13637
      Location:946 → 999
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:531 → 585
      Ank_5; Ankyrin repeats (many copies)
      pfam16592
      Location:221 → 352
      Cas9_REC; REC lobe of CRISPR-associated endonuclease Cas9
      sd00045
      Location:676 → 707
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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