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    COL3A1 collagen type III alpha 1 chain [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574131, updated on 17-Aug-2024

    Summary

    Official Symbol
    COL3A1provided by VGNC
    Official Full Name
    collagen type III alpha 1 chainprovided by VGNC
    Primary source
    VGNC:VGNC:71296
    See related
    Ensembl:ENSMMUG00000021286
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See COL3A1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    51
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (76112246..76149763)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (76381416..76418940)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671374 Neighboring gene uncharacterized protein C18orf25-like Neighboring gene GULP PTB domain containing engulfment adaptor 1 Neighboring gene microRNA mir-1245 Neighboring gene collagen type V alpha 2 chain Neighboring gene keratin, type I cytoskeletal 18 pseudogene Neighboring gene exosome complex component CSL4 pseudogene

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular matrix structural constituent IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    collagen alpha-1(III) chain
    Names
    collagen alpha-1(III) chain preproprotein
    collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266039.1NP_001252968.1  collagen alpha-1(III) chain precursor

      See identical proteins and their annotated locations for NP_001252968.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046190
      UniProtKB/TrEMBL
      A0A1D5QCX5, H9YUF2
      Related
      ENSMMUP00000045894.2, ENSMMUT00000071213.2
      Conserved Domains (3) summary
      pfam01391
      Location:234293
      Collagen; Collagen triple helix repeat (20 copies)
      pfam00093
      Location:3288
      VWC; von Willebrand factor type C domain
      pfam01410
      Location:12331465
      COLFI; Fibrillar collagen C-terminal domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      76112246..76149763
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)