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    Ces1d carboxylesterase 1D [ Mus musculus (house mouse) ]

    Gene ID: 104158, updated on 27-Dec-2024

    Summary

    Official Symbol
    Ces1dprovided by MGI
    Official Full Name
    carboxylesterase 1Dprovided by MGI
    Primary source
    MGI:MGI:2148202
    See related
    Ensembl:ENSMUSG00000056973 AllianceGenome:MGI:2148202
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TGH; Ces3
    Summary
    Enables carboxylesterase activity; sterol ester esterase activity; and triacylglycerol lipase activity. Involved in acylglycerol catabolic process. Acts upstream of or within several processes, including circadian temperature homeostasis; cold-induced thermogenesis; and lipid catabolic process. Located in cytosol; endoplasmic reticulum lumen; and lipid droplet. Is expressed in several structures, including cochlear duct; gut; liver; nose; and respiratory system. Human ortholog(s) of this gene implicated in colorectal cancer and gastrointestinal system cancer. Orthologous to human CES1 (carboxylesterase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in subcutaneous fat pad adult (RPKM 175.8), liver adult (RPKM 134.4) and 8 other tissues See more
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    Genomic context

    See Ces1d in Genome Data Viewer
    Location:
    8 C5; 8 45.05 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (93892700..93924432, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (93166072..93197804, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene carboxylesterase 1C Neighboring gene predicted gene 45910 Neighboring gene STARR-seq mESC enhancer starr_22332 Neighboring gene carboxylesterase 1E Neighboring gene carboxylesterase 1F

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables all-trans-retinyl-palmitate hydrolase, all-trans-retinol forming activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables carboxylesterase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables carboxylesterase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables carboxylic ester hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables carboxylic ester hydrolase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables fatty-acyl-ethyl-ester synthase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables retinyl-palmitate esterase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables sterol ester esterase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables sterol ester esterase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables triacylglycerol lipase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in acyl-CoA metabolic process TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in acylglycerol catabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cellular response to cholesterol ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within cellular response to cold IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cellular response to low-density lipoprotein particle stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cholesterol biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cholesterol homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cholesterol metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within circadian temperature homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cold-induced thermogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cytosolic lipolysis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in epithelial cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in lipid catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within lipid catabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in lipid catabolic process NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in medium-chain fatty acid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cholesterol storage ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cholesterol efflux ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cholesterol metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of bile acid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of bile acid secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to toxic substance TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in retinol metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in reverse cholesterol transport ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within short-chain fatty acid catabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within very-low-density lipoprotein particle assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum lumen IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in lipid droplet IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lipid droplet IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in lipid droplet ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    carboxylesterase 1D
    Names
    FAEE synthase
    carboxylesterase 3
    fatty acid ethyl ester synthase
    triacylglycerol hydrolase
    NP_444430.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053200.2NP_444430.2  carboxylesterase 1D precursor

      See identical proteins and their annotated locations for NP_444430.2

      Status: VALIDATED

      Source sequence(s)
      AA522194, AK078879, CJ133999
      Consensus CDS
      CCDS22528.1
      UniProtKB/Swiss-Prot
      Q8VCT4, Q91ZV9, Q924V8, Q9ULY1
      Related
      ENSMUSP00000034172.8, ENSMUST00000034172.8
      Conserved Domains (2) summary
      COG0657
      Location:121239
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      pfam00135
      Location:24545
      COesterase; Carboxylesterase family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      93892700..93924432 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)