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    Rv3161c dioxygenase [ Mycobacterium tuberculosis H37Rv ]

    Gene ID: 888800, updated on 6-Oct-2023

    Summary

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    Gene symbol
    Rv3161c
    Gene description
    dioxygenase
    Locus tag
    Rv3161c
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
    Lineage
    Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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    Genomic context

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    Sequence:
    NC_000962.3 (3529990..3531138, complement)

    NC_000962.3Genomic Context describing neighboring genes Neighboring gene PPE family protein PPE53 Neighboring gene TetR family transcriptional regulator Neighboring gene integral membrane protein Neighboring gene hypothetical protein Neighboring gene methanol dehydrogenase transcriptional regulator MoxR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000962.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
    2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
    3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    dioxygenase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000962.3 Reference assembly

      Range
      3529990..3531138 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_217677.1 dioxygenase [Mycobacterium tuberculosis H37Rv]

      See identical proteins and their annotated locations for NP_217677.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0E7SV19
      Conserved Domains (1) summary
      COG4638
      Location:29 → 381
      HcaE; Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit [Inorganic ion transport and metabolism, General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases