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    vapC18 ribonuclease VapC18 [ Mycobacterium tuberculosis H37Rv ]

    Gene ID: 887365, updated on 6-Aug-2024

    Summary

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    Gene symbol
    vapC18
    Gene description
    ribonuclease VapC18
    Locus tag
    Rv2546
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
    Lineage
    Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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    Genomic context

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    Sequence:
    NC_000962.3 (2868154..2868567)

    NC_000962.3Genomic Context describing neighboring genes Neighboring gene lipoprotein LppA Neighboring gene lipoprotein LppB Neighboring gene antitoxin VapB18 Neighboring gene antitoxin VapB19 Neighboring gene ribonuclease VapC19 Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000962.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
    2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
    3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ribonuclease VapC18
    NP_217062.1
    • toxin, part of toxin-antitoxin (TA) operon with Rv2545,contains PIN domain

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000962.3 Reference assembly

      Range
      2868154..2868567
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_217062.1 ribonuclease VapC18 [Mycobacterium tuberculosis H37Rv]

      See identical proteins and their annotated locations for NP_217062.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0H3LIY8, A0A654TQ74, Q7D6Y1, R4M4N4
      Conserved Domains (1) summary
      cd18755
      Location:4 → 132
      PIN_MtVapC3_VapC21-like; VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P95007.3

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