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    choD cholesterol oxidase [ Mycobacterium tuberculosis H37Rv ]

    Gene ID: 887502, updated on 4-Feb-2024

    Summary

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    Gene symbol
    choD
    Gene description
    cholesterol oxidase
    Locus tag
    Rv3409c
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
    Lineage
    Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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    Genomic context

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    Sequence:
    NC_000962.3 (3826991..3828727, complement)

    NC_000962.3Genomic Context describing neighboring genes Neighboring gene dioxygenase Neighboring gene antitoxin VapB47 Neighboring gene ribonuclease VapC47 Neighboring gene oxidoreductase Neighboring gene inosine-5'-monophosphate dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000962.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ChoD and HsdD can be dispensable for cholesterol degradation in mycobacteria. Brzostek A, et al. J Steroid Biochem Mol Biol, 2013 Mar. PMID 23064392
    2. Cholesterol oxidase is required for virulence of Mycobacterium tuberculosis. Brzostek A, et al. FEMS Microbiol Lett, 2007 Oct. PMID 17651430
    3. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
    4. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
    5. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    cholesterol oxidase
    NP_217926.1
    • cholesterol-O2 oxidoreductase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000962.3 Reference assembly

      Range
      3826991..3828727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_217926.1 cholesterol oxidase [Mycobacterium tuberculosis H37Rv]

      See identical proteins and their annotated locations for NP_217926.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A654T9T3
      Conserved Domains (1) summary
      COG2303
      Location:1 → 531
      BetA; Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P9WMV9.1

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