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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_033976.1 RefSeqGene
- Range
-
14701..19777
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001007272.2 → NP_001007273.1 dual specificity protein phosphatase 13B isoform 2
See identical proteins and their annotated locations for NP_001007273.1
Status: REVIEWED
- Description
- Transcript Variant: TThis variant (2) represents use of an alternate promoter and therefore differs in the 5' UTR and 5' coding region, compared to variant 9. The encoded isoform (2, also called TMDP-L2) has an alternate N-terminus, compared to isoform 9. Efforts to detect expression of isoform 2 were unsuccessful.
- Source sequence(s)
-
AI971328, AK127886, AY674051
- Consensus CDS
-
CCDS31224.1
- UniProtKB/TrEMBL
-
U3KQA1
- Conserved Domains (1) summary
-
- cd00127
Location:95 → 238
- DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
-
NM_001007273.2 → NP_001007274.1 dual specificity protein phosphatase 13B isoform 3 precursor
See identical proteins and their annotated locations for NP_001007274.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents use of an alternate promoter and therefore differs in the 5' UTR and 5' coding region, compared to variant 9. The encoded isoform (3, also called TMDP-L1) has an alternate N-terminus, compared to isoform 9. Efforts to detect expression of isoform 3 were unsuccessful. Both variants 3 and 7 encode the same isoform (3).
- Source sequence(s)
-
AI971328, AK127886, AY674051, BU580940
- UniProtKB/TrEMBL
-
A0A9L9PXN7
- Related
- ENSP00000516748.1, ENST00000707120.1
- Conserved Domains (1) summary
-
- cd00127
Location:138 → 281
- DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
-
NM_001320842.2 → NP_001307771.1 dual specificity protein phosphatase 13B isoform 3 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) represents use of an alternate promoter and therefore differs in the 5' UTR and 5' coding region, compared to variant 9. The encoded isoform (3, also known as TMDP-L1) has an alternate N-terminus, compared to isoform 9. Both variants 3 and 7 encode the same isoform (3).
- Source sequence(s)
-
AI971328, AK127886, AY674051
- UniProtKB/TrEMBL
-
A0A9L9PXN7
- Conserved Domains (1) summary
-
- cd00127
Location:138 → 281
- DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
-
NM_001320843.2 → NP_001307772.1 dual specificity protein phosphatase 13B isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) represents use of an alternate promoter and therefore differs in the 5' UTR and 5' coding region, compared to variant 9. The encoded isoform (6, also known as TMDP) has a shorter N-terminus, compared to isoform 9. Both variants 6 and 8 encode the same isoform (6).
- Source sequence(s)
-
AI971328, AK057012, AY674051, DA898973
- Consensus CDS
-
CCDS7346.1
- UniProtKB/Swiss-Prot
- A0A024QZR6, A8K776, A8K782, B3KPY1, B3KXT0, B4DUK0, Q5JSC6, Q6IAR0, Q96GC2, Q9UII6, U3KQ82
- UniProtKB/TrEMBL
-
U3KQA1
- Related
- ENSP00000516749.1, ENST00000707121.1
- Conserved Domains (1) summary
-
- cd14577
Location:28 → 191
- DUSP13B; dual specificity protein phosphatase 13 isoform B
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NM_001363514.2 → NP_001350443.1 dual specificity protein phosphatase 13B isoform 9
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) represents the allele encoded by the GRCh38 reference genome and encodes isoform 9.
- Source sequence(s)
-
AL392111
- Consensus CDS
-
CCDS86105.1
- Related
- ENSP00000475626.1, ENST00000478873.7
- Conserved Domains (1) summary
-
- cd00127
Location:181 → 324
- DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
-
NM_001412227.1 → NP_001399156.1 dual specificity protein phosphatase 13B isoform 10
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) uses the same exon combination as variant 9 but represents the allele encoded by the T2T-CHM13v2.0 genome assembly. The encoded isoform (10) has a shorter N-terminus due to translation initiation at a downstream start codon, compared to isoform 9.
- Source sequence(s)
-
CP068268
- UniProtKB/TrEMBL
-
U3KQA1
-
NM_016364.3 → NP_057448.3 dual specificity protein phosphatase 13B isoform 6
See identical proteins and their annotated locations for NP_057448.3
Status: REVIEWED
- Description
- Transcript Variant: TThis variant (6) uses a downstream in-frame start codon, compared to variant 9. The encoded isoform (6, also called TMDP) has a shorter N-terminus, compared to isoform 9. Both variants 6 and 8 encode the same isoform (6).
- Source sequence(s)
-
AB027004
- Consensus CDS
-
CCDS7346.1
- UniProtKB/Swiss-Prot
- A0A024QZR6, A8K776, A8K782, B3KPY1, B3KXT0, B4DUK0, Q5JSC6, Q6IAR0, Q96GC2, Q9UII6, U3KQ82
- UniProtKB/TrEMBL
-
U3KQA1
- Related
- ENSP00000444580.1, ENST00000472493.6
- Conserved Domains (1) summary
-
- cd14577
Location:28 → 191
- DUSP13B; dual specificity protein phosphatase 13 isoform B
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
75094434..75109191 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
75967932..75982690 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001007274.1: Suppressed sequence
- Description
- NM_001007274.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
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NM_001007275.1: Suppressed sequence
- Description
- NM_001007275.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.