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    Prok1 prokineticin 1 [ Mus musculus (house mouse) ]

    Gene ID: 246691, updated on 9-Dec-2024

    Summary

    Official Symbol
    Prok1provided by MGI
    Official Full Name
    prokineticin 1provided by MGI
    Primary source
    MGI:MGI:2180370
    See related
    Ensembl:ENSMUSG00000070368 AllianceGenome:MGI:2180370
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG-VEGF
    Summary
    Predicted to enable G protein-coupled receptor binding activity. Acts upstream of or within positive regulation of MAPK cascade; positive regulation of vascular endothelial cell proliferation; and regulation of angiogenesis. Located in extracellular region. Is expressed in embryo; liver; lung; metanephros; and testis. Orthologous to human PROK1 (prokineticin 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in liver E18 (RPKM 8.2), kidney adult (RPKM 2.6) and 1 other tissue See more
    Orthologs
    NEW
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    Genomic context

    See Prok1 in Genome Data Viewer
    Location:
    3 F2.3; 3 46.72 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (107139232..107147023, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (107231916..107239707, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel, shaker-related subfamily, member 10 Neighboring gene STARR-seq mESC enhancer starr_08660 Neighboring gene RIKEN cDNA A630076J17 gene Neighboring gene chymosin Neighboring gene STARR-positive B cell enhancer ABC_E6103 Neighboring gene STARR-positive B cell enhancer mm9_chr3:107081789-107082089 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 Neighboring gene solute carrier family 16 (monocarboxylic acid transporters), member 4 Neighboring gene RNA binding motif protein 15

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    General protein information

    Preferred Names
    prokineticin-1
    Names
    endocrine-gland-derived vascular endothelial growth factor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001044382.2NP_001037847.1  prokineticin-1 isoform 1 precursor

      See identical proteins and their annotated locations for NP_001037847.1

      Status: VALIDATED

      Source sequence(s)
      AC132405, AK044344, AW123932, BC117006
      Consensus CDS
      CCDS38589.1
      UniProtKB/Swiss-Prot
      Q0P609, Q14A28, Q8K457
      Related
      ENSMUSP00000060617.9, ENSMUST00000049852.10
      Conserved Domains (1) summary
      pfam06607
      Location:196
      Prokineticin; Prokineticin
    2. NM_001357885.1NP_001344814.1  prokineticin-1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC132405, AW123932
      Consensus CDS
      CCDS89674.1
      Related
      ENSMUSP00000143197.2, ENSMUST00000197758.5
      Conserved Domains (1) summary
      pfam06607
      Location:380
      Prokineticin; Prokineticin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      107139232..107147023 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017319583.1XP_017175072.1  prokineticin-1 isoform X1

      Conserved Domains (1) summary
      pfam06607
      Location:29100
      Prokineticin