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    LOC286177 uncharacterized LOC286177 [ Homo sapiens (human) ]

    Gene ID: 286177, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC286177
    Gene description
    uncharacterized LOC286177
    See related
    Ensembl:ENSG00000253614
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC286177 in Genome Data Viewer
    Location:
    8q12.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (57261226..57266611)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (57682766..57688151)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (58173785..58179170)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 266 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:58118103-58118604 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:58121391-58122590 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:58122972-58123472 Neighboring gene MPRA-validated peak7032 silencer Neighboring gene long intergenic non-protein coding RNA 1606 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:58172381-58172962 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:58173547-58174128 Neighboring gene MPRA-validated peak7033 silencer Neighboring gene long intergenic non-protein coding RNA 588 Neighboring gene RNA, U6 small nuclear 596, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038874.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC025674, BC036235
      Related
      ENST00000522622.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      57261226..57266611
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187566.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      99640..105025
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      57682766..57688151
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)