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    Kctd12 potassium channel tetramerisation domain containing 12 [ Mus musculus (house mouse) ]

    Gene ID: 239217, updated on 9-Dec-2024

    Summary

    Official Symbol
    Kctd12provided by MGI
    Official Full Name
    potassium channel tetramerisation domain containing 12provided by MGI
    Primary source
    MGI:MGI:2145823
    See related
    Ensembl:ENSMUSG00000098557 AllianceGenome:MGI:2145823
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pfet1; Pfetin
    Summary
    Enables G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential and G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential. Acts upstream of or within regulation of G protein-coupled receptor signaling pathway. Part of receptor complex. Is active in GABA-ergic synapse; postsynaptic membrane; and presynaptic active zone membrane. Is expressed in several structures, including central nervous system; eye; genitourinary system; gut; and inner ear. Orthologous to human KCTD12 (potassium channel tetramerization domain containing 12). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Kctd12 in Genome Data Viewer
    Location:
    14 E2.3; 14 51.55 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (103214017..103220073, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (102976581..102982637, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4124 Neighboring gene predicted gene, 41234 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:103209351-103209504 Neighboring gene predicted gene, 34589 Neighboring gene STARR-positive B cell enhancer ABC_E11577 Neighboring gene STARR-positive B cell enhancer ABC_E8575 Neighboring gene STARR-positive B cell enhancer ABC_E7345 Neighboring gene STARR-positive B cell enhancer ABC_E7346 Neighboring gene STARR-positive B cell enhancer ABC_E5463 Neighboring gene STARR-positive B cell enhancer ABC_E10837 Neighboring gene RIKEN cDNA 4933432I03 gene Neighboring gene STARR-positive B cell enhancer mm9_chr14:103394496-103394797 Neighboring gene microRNA 5130 Neighboring gene STARR-positive B cell enhancer ABC_E11578 Neighboring gene ribosomal protein L17, pseudogene 7 Neighboring gene predicted gene, 34643

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in GABA-ergic synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in GABA-ergic synapse IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in postsynaptic membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in presynaptic active zone membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in presynaptic membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in presynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in presynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of receptor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    BTB/POZ domain-containing protein KCTD12
    Names
    potassium channel tetramerization domain containing 12
    predominantly fetal expressed T1 domain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177715.4NP_808383.3  BTB/POZ domain-containing protein KCTD12

      See identical proteins and their annotated locations for NP_808383.3

      Status: VALIDATED

      Source sequence(s)
      AK087895, AK173260, BP753689, CF538046
      Consensus CDS
      CCDS70611.1
      UniProtKB/Swiss-Prot
      Q3T9E3, Q6WVG3
      UniProtKB/TrEMBL
      A0A0R4J2B2
      Related
      ENSMUSP00000139261.2, ENSMUST00000184744.2
      Conserved Domains (1) summary
      cl02518
      Location:36125
      BTB; BTB/POZ domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      103214017..103220073 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)