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    Dalir DNMT1 associated long intergenic non-coding RNA [ Mus musculus (house mouse) ]

    Gene ID: 104940697, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Dalirprovided by MGI
    Official Full Name
    DNMT1 associated long intergenic non-coding RNAprovided by MGI
    Primary source
    MGI:MGI:5579231
    See related
    Ensembl:ENSMUSG00000099784 AllianceGenome:MGI:5579231
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Dali; Gm28525
    Summary
    Orthologous to human DALIR (DNMT1-associated long intergenic non-coding RNA). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human all
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    Genomic context

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    See Dalir in Genome Data Viewer
    Location:
    1 B; 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (42789872..42792046)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (42750712..42752886)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2900092D14 gene Neighboring gene predicted gene 20646 Neighboring gene POU domain, class 3, transcription factor 3 adjacent noncoding transcript 2 Neighboring gene STARR-seq mESC enhancer starr_00768 Neighboring gene predicted gene, 53552 Neighboring gene mitochondrial ribosomal protein S9 Neighboring gene predicted gene, 23126

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The long non-coding RNA Dali is an epigenetic regulator of neural differentiation. Chalei V, et al. Elife, 2014 Nov 21. PMID 25415054, Free PMC Article
    2. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    3. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Other Names

    • DNMT1-associated long intergenic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_130904.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC133952, AK034039, AW489559
      Related
      ENSMUST00000188773.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      42789872..42792046
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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