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    Bpifa1 BPI fold containing family A, member 1 [ Mus musculus (house mouse) ]

    Gene ID: 18843, updated on 9-Dec-2024

    Summary

    Official Symbol
    Bpifa1provided by MGI
    Official Full Name
    BPI fold containing family A, member 1provided by MGI
    Primary source
    MGI:MGI:1338036
    See related
    Ensembl:ENSMUSG00000027483 AllianceGenome:MGI:1338036
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    LUNX; NASG; Plunc; SPURT; SPLUNC1
    Summary
    Predicted to enable lipid binding activity. Involved in antibacterial humoral response; innate immune response; and negative regulation of single-species biofilm formation in or on host organism. Predicted to be located in extracellular region and microvillus. Predicted to be active in extracellular space. Is expressed in hemolymphoid system; nose; respiratory system; and turbinate bone. Used to study otitis media. Orthologous to human BPIFA1 (BPI fold containing family A member 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in lung adult (RPKM 182.2) and heart adult (RPKM 116.8) See more
    Orthologs
    NEW
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    Genomic context

    See Bpifa1 in Genome Data Viewer
    Location:
    2 H1; 2 76.15 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (153984800..153991137)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (154142880..154149217)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene Friend virus susceptibility protein 1-like Neighboring gene STARR-seq mESC enhancer starr_06110 Neighboring gene BPI fold containing family A, member 3 Neighboring gene BPI fold containing family A, member 5 Neighboring gene STARR-seq mESC enhancer starr_06112 Neighboring gene BPI fold containing family B, member 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in antibacterial humoral response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in antibacterial humoral response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in antibacterial humoral response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in immune response in nasopharyngeal-associated lymphoid tissue IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in innate immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in innate immune response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in innate immune response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in multicellular organismal-level water homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in multicellular organismal-level water homeostasis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of single-species biofilm formation in or on host organism IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of single-species biofilm formation in or on host organism IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of single-species biofilm formation in or on host organism ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of sodium ion transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of sodium ion transmembrane transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in surfactant homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in surfactant homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in surfactant homeostasis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular region ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in microvillus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in microvillus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    BPI fold-containing family A member 1
    Names
    palate lung and nasal epithelium clone protein
    palate, lung, and nasal epithelium associated
    palate, lung, and nasal epithelium clone
    palate, lung, and nasal epithelium expressed transcript
    protein Plunc

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011126.3NP_035256.2  BPI fold-containing family A member 1 precursor

      See identical proteins and their annotated locations for NP_035256.2

      Status: VALIDATED

      Source sequence(s)
      BC054375, BY121014
      Consensus CDS
      CCDS16925.1
      UniProtKB/Swiss-Prot
      P97361, Q7TQJ2
      Related
      ENSMUSP00000028985.8, ENSMUST00000028985.8
      Conserved Domains (1) summary
      pfam01273
      Location:93256
      LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      153984800..153991137
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)