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    Gm5154 predicted gene 5154 [ Mus musculus (house mouse) ]

    Gene ID: 381818, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm5154provided by MGI
    Official Full Name
    predicted gene 5154provided by MGI
    Primary source
    MGI:MGI:3646668
    See related
    AllianceGenome:MGI:3646668
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG381818
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    Genomic context

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    See Gm5154 in Genome Data Viewer
    Location:
    6 G1; 6 64.03 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (132415494..132418687, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (132438531..132441724, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene Neighboring gene proline-rich protein BstNI subfamily 1C Neighboring gene cyclin-dependent kinase 4 pseudogene Neighboring gene STARR-seq mESC enhancer starr_17506 Neighboring gene STARR-seq mESC enhancer starr_17507 Neighboring gene STARR-seq mESC enhancer starr_17508 Neighboring gene predicted gene, 18326 Neighboring gene STARR-seq mESC enhancer starr_17509 Neighboring gene STARR-seq mESC enhancer starr_17510 Neighboring gene STARR-seq mESC enhancer starr_17511 Neighboring gene proline rich protein HaeIII subfamily 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Clone Names

    • MGC78233

    General protein information

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    Preferred Names
    proline-rich proteoglycan 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      132415494..132418687 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055019524.1 → XP_054875499.1  proline-rich proteoglycan 2 isoform X2

    2. XM_055019525.1 → XP_054875500.1  proline-rich proteoglycan 2 isoform X3

    3. XM_055019523.1 → XP_054875498.1  proline-rich proteoglycan 2 isoform X1

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001004160.1: Suppressed sequence

      Description
      NM_001004160.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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