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    E230015B07Rik RIKEN cDNA E230015B07 gene [ Mus musculus (house mouse) ]

    Gene ID: 320001, updated on 22-Oct-2024

    Summary

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    Official Symbol
    E230015B07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA E230015B07 geneprovided by MGI
    Primary source
    MGI:MGI:2443140
    See related
    Ensembl:ENSMUSG00000121511 AllianceGenome:MGI:2443140
    Gene type
    unknown
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in testis adult (RPKM 1.5), bladder adult (RPKM 1.0) and 13 other tissues See more

    Genomic context

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    See E230015B07Rik in Genome Data Viewer
    Location:
    6 D1; 6 38.74 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (87649352..87658180)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (87672370..87681162)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene aprataxin and PNKP like factor Neighboring gene predicted gene, 38852 Neighboring gene predicted gene, 44097 Neighboring gene STARR-positive B cell enhancer ABC_E9276 Neighboring gene STARR-positive B cell enhancer ABC_E1067 Neighboring gene cilia and flagella associated protein 92 Neighboring gene STARR-seq mESC enhancer starr_16564 Neighboring gene STARR-positive B cell enhancer ABC_E9277 Neighboring gene EF hand and coiled-coil domain containing 1 Neighboring gene predicted gene, 34414 Neighboring gene 60S ribosomal protein L3 related

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Quantitative genetics of age-related retinal degeneration: a second F1 intercross between the A/J and C57BL/6 strains. Danciger M, et al. Mol Vis, 2007 Jan 25. PMID 17277741, Free PMC Article
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      87649352..87658180
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003956325.2 RNA Sequence

      Related
      ENSMUST00000159884.9

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_177057.2: Suppressed sequence

      Description
      NM_177057.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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