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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_015963.1 RefSeqGene
- Range
-
5027..69001
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001167890.2 → NP_001161362.1 epidermal growth factor-like protein 6 isoform 2 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the coding region, compared to variant 1. It encodes isoform 2 which is 1 aa longer than isoform 1.
- Source sequence(s)
-
AJ245671, DA534733, DC380958
- Consensus CDS
-
CCDS55370.1
- UniProtKB/Swiss-Prot
-
Q8IUX8
- Related
- ENSP00000369976.3, ENST00000380602.3
- Conserved Domains (4) summary
-
- cd06263
Location:403 → 545
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00179
Location:174 → 207
- EGF_CA; Calcium-binding EGF-like domain
- pfam00629
Location:403 → 546
- MAM; MAM domain, meprin/A5/mu
- pfam12947
Location:223 → 258
- EGF_3; EGF domain
-
NM_015507.4 → NP_056322.2 epidermal growth factor-like protein 6 isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the shorter transcript and encodes the shorter isoform.
- Source sequence(s)
-
BC038587, DA534733, DC380958
- Consensus CDS
-
CCDS14155.1
- UniProtKB/Swiss-Prot
- B2RCB1, Q6UXJ1, Q8IUX8, Q8NBV0, Q8WYG3, Q9NY67, Q9NZL7, Q9UFK6
- Related
- ENSP00000355126.1, ENST00000361306.6
- Conserved Domains (3) summary
-
- cd06263
Location:402 → 544
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00179
Location:174 → 207
- EGF_CA; Calcium-binding EGF-like domain
- pfam12947
Location:223 → 258
- EGF_3; EGF domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
13569601..13633575
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
13151011..13214962
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)