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    Rhox8 reproductive homeobox 8 [ Mus musculus (house mouse) ]

    Gene ID: 434768, updated on 27-Nov-2024

    Summary

    Official Symbol
    Rhox8provided by MGI
    Official Full Name
    reproductive homeobox 8provided by MGI
    Primary source
    MGI:MGI:3579898
    See related
    Ensembl:ENSMUSG00000064137 AllianceGenome:MGI:3579898
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tox
    Summary
    Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific. Acts upstream of or within regulation of gene expression and spermatogenesis. Located in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 2.9) See more
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    Genomic context

    See Rhox8 in Genome Data Viewer
    Location:
    X A3.3; X 22.12 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (36963657..36979643, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (37874780..37890766, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene reproductive homeobox 6 Neighboring gene reproductive homeobox 7A Neighboring gene reproductive homeobox 7B Neighboring gene reproductive homeobox 9 Neighboring gene STARR-seq mESC enhancer starr_47011 Neighboring gene reproductive homeobox 11, pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General protein information

    Preferred Names
    reproductive homeobox on X chromosome, 8
    Names
    homeoprotein TOX

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001004193.3NP_001004193.1  reproductive homeobox on X chromosome, 8

      See identical proteins and their annotated locations for NP_001004193.1

      Status: VALIDATED

      Source sequence(s)
      AL590629, AY329370
      Consensus CDS
      CCDS30082.1
      UniProtKB/TrEMBL
      Q4TU85, Q6VSS7
      Related
      ENSMUSP00000071782.6, ENSMUST00000071885.7
      Conserved Domains (1) summary
      cd00086
      Location:261317
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      36963657..36979643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011251014.1XP_011249316.1  reproductive homeobox on X chromosome, 8 isoform X1

      See identical proteins and their annotated locations for XP_011249316.1

      UniProtKB/TrEMBL
      Q4TU85
      Conserved Domains (1) summary
      cd00086
      Location:237293
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.