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    Potefam3c POTE ankyrin domain family member 3C [ Mus musculus (house mouse) ]

    Gene ID: 670593, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Potefam3cprovided by MGI
    Official Full Name
    POTE ankyrin domain family member 3Cprovided by MGI
    Primary source
    MGI:MGI:3779905
    See related
    Ensembl:ENSMUSG00000107280 AllianceGenome:MGI:3779905
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm9495; Pote3c
    Summary
    Orthologous to human POTEJ (POTE ankyrin domain family member J). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 24.4) See more
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    Genomic context

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    See Potefam3c in Genome Data Viewer
    Location:
    8 B3.3; 8 33.88 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (69873342..69906699, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (69420690..69454048, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 1 pseudogene Neighboring gene predicted gene 10033 Neighboring gene STARR-seq mESC enhancer starr_21735 Neighboring gene STARR-positive B cell enhancer mm9_chr8:71994362-71994663 Neighboring gene POTE ankyrin domain family member 3D Neighboring gene STARR-seq mESC enhancer starr_21736 Neighboring gene ribosomal protein S7, pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    putative POTE ankyrin domain family member M; uncharacterized protein Potefam3c

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      69873342..69906699 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017313037.2 → XP_017168526.1  uncharacterized protein Potefam3c isoform X1

      Conserved Domains (3) summary
      pfam05109
      Location:368 → 516
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:86 → 115
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:89 → 180
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_001475988.6 → XP_001476038.2  putative POTE ankyrin domain family member M isoform X2

      UniProtKB/TrEMBL
      A0A0J9YUZ3, B9EK96
      Related
      ENSMUSP00000144411.2, ENSMUST00000200846.2
      Conserved Domains (2) summary
      sd00045
      Location:86 → 115
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:89 → 180
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein Strain
    Heading Accession and Version

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