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    2210039B01Rik RIKEN cDNA 2210039B01 gene [ Mus musculus (house mouse) ]

    Gene ID: 73644, updated on 17-Aug-2024

    Summary

    Official Symbol
    2210039B01Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2210039B01 geneprovided by MGI
    Primary source
    MGI:MGI:1920894
    See related
    Ensembl:ENSMUSG00000113800 AllianceGenome:MGI:1920894
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in bladder adult (RPKM 1.3), colon adult (RPKM 0.8) and 12 other tissues See more
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    Genomic context

    See 2210039B01Rik in Genome Data Viewer
    Location:
    12; 12 C3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (73595257..73598760)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (73548483..73551986)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34080 Neighboring gene STARR-seq mESC enhancer starr_32473 Neighboring gene predicted gene, 34016 Neighboring gene transmembrane protein 30B Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:74699241-74699512 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:74705920-74706029 Neighboring gene STARR-seq mESC enhancer starr_32475 Neighboring gene protein kinase C, eta Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:74880254-74880437 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:74880601-74880802 Neighboring gene predicted gene, 34189 Neighboring gene predicted gene 8075

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_044985.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AK008780
      Related
      ENSMUST00000222490.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      73595257..73598760
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)