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    Mttp microsomal triglyceride transfer protein [ Mus musculus (house mouse) ]

    Gene ID: 17777, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mttpprovided by MGI
    Official Full Name
    microsomal triglyceride transfer proteinprovided by MGI
    Primary source
    MGI:MGI:106926
    See related
    Ensembl:ENSMUSG00000028158 AllianceGenome:MGI:106926
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MTP; 1810043K16Rik
    Summary
    Enables cholesterol transfer activity; phosphatidylethanolamine transfer activity; and triglyceride transfer activity. Involved in circadian rhythm. Acts upstream of or within several processes, including cholesterol homeostasis; lipoprotein transport; and low-density lipoprotein particle remodeling. Located in endoplasmic reticulum. Is expressed in several structures, including gut; liver; placenta; septum transversum hepatic component; and yolk sac. Human ortholog(s) of this gene implicated in several diseases, including abetalipoproteinemia; familial hypercholesterolemia; hyperinsulinism; metabolic dysfunction-associated steatotic liver disease; and obesity. Orthologous to human MTTP (microsomal triglyceride transfer protein). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in large intestine adult (RPKM 62.5), duodenum adult (RPKM 33.4) and 6 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mttp in Genome Data Viewer
    Location:
    3 G3; 3 64.06 cM
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (137795616..137849179, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (138089855..138143418, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1110002E22 gene Neighboring gene predicted gene 5105 Neighboring gene STARR-seq mESC enhancer starr_09105 Neighboring gene predicted gene, 52617 Neighboring gene STARR-positive B cell enhancer mm9_chr3:137778444-137778744 Neighboring gene STARR-seq mESC enhancer starr_09106 Neighboring gene STARR-positive B cell enhancer ABC_E3473 Neighboring gene tRNA methyltransferase 10A Neighboring gene RIKEN cDNA 4930579F01 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (3)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables apolipoprotein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables apolipoprotein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables ceramide 1-phosphate transfer activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables cholesterol transfer activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables cholesterol transfer activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables lipid transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables lipid transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables phosphatidylcholine transfer activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatidylcholine transfer activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables phosphatidylethanolamine transfer activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables phosphatidylethanolamine transfer activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables phospholipid transfer activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables phospholipid transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein heterodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein heterodimerization activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein-containing complex binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables triglyceride transfer activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables triglyceride transfer activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in ceramide 1-phosphate transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cholesterol homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within cholesterol homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cholesterol metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in circadian rhythm IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within establishment of localization in cell IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in intermembrane lipid transfer IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within lipid metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in lipid transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in lipoprotein metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within lipoprotein metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in lipoprotein metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within lipoprotein transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within low-density lipoprotein particle remodeling IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in phospholipid transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phospholipid transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in plasma lipoprotein particle assembly ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in plasma lipoprotein particle assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within protein lipidation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein secretion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sterol transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within triglyceride metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in triglyceride transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in triglyceride transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in basolateral plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in basolateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in basolateral plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in brush border membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in brush border membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in microvillus membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in microvillus membrane ISO
    Inferred from Sequence Orthology
    more info
     
    part_of receptor complex ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in vesicle ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    microsomal triglyceride transfer protein large subunit
    Names
    microsomal triglyceride transfer protein B
    microsomal triglyceride transfer protein, large subunit

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001163457.2NP_001156929.1  microsomal triglyceride transfer protein large subunit isoform 1 precursor

      See identical proteins and their annotated locations for NP_001156929.1

      Status: VALIDATED

      Source sequence(s)
      AC131122, AK136278, AK146553
      Consensus CDS
      CCDS51080.1
      UniProtKB/Swiss-Prot
      O08601
      Related
      ENSMUSP00000096179.3, ENSMUST00000098580.6
      Conserved Domains (1) summary
      cl26969
      Location:43594
      Vitellogenin_N; Lipoprotein amino terminal region
    2. NM_001355051.1NP_001341980.1  microsomal triglyceride transfer protein large subunit isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC131122
      Consensus CDS
      CCDS38650.1
      UniProtKB/Swiss-Prot
      B2CXA7, O08601, Q3UJA0, Q91X33
      Conserved Domains (1) summary
      cl26969
      Location:28579
      Vitellogenin_N; Lipoprotein amino terminal region
    3. NM_001355052.1NP_001341981.1  microsomal triglyceride transfer protein large subunit isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC131122
      Consensus CDS
      CCDS38650.1
      UniProtKB/Swiss-Prot
      B2CXA7, O08601, Q3UJA0, Q91X33
      Conserved Domains (1) summary
      cl26969
      Location:28579
      Vitellogenin_N; Lipoprotein amino terminal region
    4. NM_008642.3NP_032668.2  microsomal triglyceride transfer protein large subunit isoform 2 precursor

      See identical proteins and their annotated locations for NP_032668.2

      Status: VALIDATED

      Source sequence(s)
      AC131122, AK146553
      Consensus CDS
      CCDS38650.1
      UniProtKB/Swiss-Prot
      B2CXA7, O08601, Q3UJA0, Q91X33
      Related
      ENSMUSP00000029805.9, ENSMUST00000029805.13
      Conserved Domains (1) summary
      cl26969
      Location:28579
      Vitellogenin_N; Lipoprotein amino terminal region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      137795616..137849179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006501102.4XP_006501165.1  microsomal triglyceride transfer protein large subunit isoform X1

      See identical proteins and their annotated locations for XP_006501165.1

      UniProtKB/Swiss-Prot
      O08601
      Conserved Domains (1) summary
      cl26969
      Location:43594
      Vitellogenin_N; Lipoprotein amino terminal region
    2. XM_006501103.4XP_006501166.1  microsomal triglyceride transfer protein large subunit isoform X2

      See identical proteins and their annotated locations for XP_006501166.1

      UniProtKB/Swiss-Prot
      B2CXA7, O08601, Q3UJA0, Q91X33
      Conserved Domains (1) summary
      cl26969
      Location:28579
      Vitellogenin_N; Lipoprotein amino terminal region