U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tmprss12 transmembrane (C-terminal) protease, serine 12 [ Mus musculus (house mouse) ]

    Gene ID: 75002, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tmprss12provided by MGI
    Official Full Name
    transmembrane (C-terminal) protease, serine 12provided by MGI
    Primary source
    MGI:MGI:1922252
    See related
    Ensembl:ENSMUSG00000045631 AllianceGenome:MGI:1922252
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930478A21Rik
    Summary
    Predicted to enable serine-type endopeptidase activity. Involved in acrosome assembly and positive regulation of sperm capacitation. Acts upstream of or within binding activity of sperm to zona pellucida and protein processing. Located in acrosomal vesicle. Orthologous to human TMPRSS12 (transmembrane serine protease 12). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 14.1) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tmprss12 in Genome Data Viewer
    Location:
    15 F1; 15 56.24 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (100178743..100190943)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (100280837..100293056)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr15:99890852-99891153 Neighboring gene disco interacting protein 2 homolog B Neighboring gene STARR-seq mESC enhancer starr_39737 Neighboring gene STARR-seq mESC enhancer starr_39738 Neighboring gene STARR-seq mESC enhancer starr_39739 Neighboring gene STARR-seq mESC enhancer starr_39742 Neighboring gene activating transcription factor 1 Neighboring gene STARR-seq mESC enhancer starr_39744 Neighboring gene STARR-seq mESC enhancer starr_39745 Neighboring gene STARR-seq mESC enhancer starr_39746 Neighboring gene STARR-seq mESC enhancer starr_39747 Neighboring gene STARR-positive B cell enhancer ABC_E9423 Neighboring gene predicted gene, 33666 Neighboring gene predicted gene, 53910 Neighboring gene thiol methyltransferase 1A1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4)  1 citation
    • Gene trapped (1) 

    General protein information

    Preferred Names
    transmembrane protease serine 12

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001418781.1NP_001405710.1  transmembrane protease serine 12 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC124479
    2. NM_183109.4NP_898932.2  transmembrane protease serine 12 isoform 1 precursor

      See identical proteins and their annotated locations for NP_898932.2

      Status: VALIDATED

      Source sequence(s)
      AC124479
      Consensus CDS
      CCDS49732.1
      UniProtKB/Swiss-Prot
      Q3V0Q7
      Related
      ENSMUSP00000093914.5, ENSMUST00000096200.6
      Conserved Domains (2) summary
      smart00020
      Location:65300
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:66300
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      100178743..100190943
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)