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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001291049.1 → NP_001277978.1 ubiquitin carboxyl-terminal hydrolase 43 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the central coding region, compared to variant 1. The encoded isoform (2) is shorter, compared to isoform 1.
- Source sequence(s)
-
AK042217, AK083271, AL732570
- Consensus CDS
-
CCDS70212.1
- UniProtKB/TrEMBL
-
A6PWR8
- Related
- ENSMUSP00000104317.2, ENSMUST00000108677.2
- Conserved Domains (2) summary
-
- cd02674
Location:536 → 703
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:102 → 284
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
-
NM_173754.4 → NP_776115.2 ubiquitin carboxyl-terminal hydrolase 43 isoform 1
See identical proteins and their annotated locations for NP_776115.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AK042217, AK083271, AL732570
- Consensus CDS
-
CCDS24861.2
- UniProtKB/Swiss-Prot
- Q8BUM9, Q8VDP5
- Related
- ENSMUSP00000021288.4, ENSMUST00000021288.10
- Conserved Domains (2) summary
-
- cd02674
Location:536 → 708
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:102 → 284
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000077.7 Reference GRCm39 C57BL/6J
- Range
-
67745349..67812979 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011248915.4 → XP_011247217.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X1
- Conserved Domains (1) summary
-
- cd02674
Location:225 → 397
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
-
XM_017314453.2 → XP_017169942.1 ubiquitin carboxyl-terminal hydrolase 43 isoform X2
- Conserved Domains (1) summary
-
- cd02674
Location:93 → 265
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...