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    Spata31h1 SPATA31 subfamily H member 1 [ Mus musculus (house mouse) ]

    Gene ID: 102635990, updated on 9-Aug-2024

    Summary

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    Gene symbol
    Spata31h1
    Gene description
    SPATA31 subfamily H member 1
    See related
    Ensembl:ENSMUSG00000044581
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C10H2orf16
    Expression
    Restricted expression toward testis adult (RPKM 6.3) See more
    Orthologs
    human all
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    Genomic context

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    See Spata31h1 in Genome Data Viewer
    Location:
    10 C1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (82117948..82152415, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (82282114..82316581, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene mitochondrial pyruvate carrier 2 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E8352 Neighboring gene zinc finger protein 938 Neighboring gene STARR-seq mESC enhancer starr_27359 Neighboring gene STARR-positive B cell enhancer mm9_chr10:81816788-81817089 Neighboring gene predicted gene 4924 Neighboring gene STARR-seq mESC enhancer starr_27361 Neighboring gene mitogen-activated protein kinase kinase kinase 7 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    spermatogenesis-associated protein 31H1
    Names
    chromosome 10 C2orf16 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      82117948..82152415 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006514362.2 → XP_006514425.1  spermatogenesis-associated protein 31H1 isoform X2

      Conserved Domains (1) summary
      PHA02682
      Location:2746 → 2824
      PHA02682; ORF080 virion core protein; Provisional

    2. XM_006514360.2 → XP_006514423.1  spermatogenesis-associated protein 31H1 isoform X1

      UniProtKB/TrEMBL
      A0A1W2P6U8
      Related
      ENSMUSP00000151425.2, ENSMUST00000217661.2
      Conserved Domains (1) summary
      PHA02682
      Location:2805 → 2883
      PHA02682; ORF080 virion core protein; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials