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    Kcnk3 potassium channel, subfamily K, member 3 [ Mus musculus (house mouse) ]

    Gene ID: 16527, updated on 27-Dec-2024

    Summary

    Official Symbol
    Kcnk3provided by MGI
    Official Full Name
    potassium channel, subfamily K, member 3provided by MGI
    Primary source
    MGI:MGI:1100509
    See related
    Ensembl:ENSMUSG00000049265 AllianceGenome:MGI:1100509
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TASK; Task-1; cTBAK-1
    Summary
    Predicted to enable S100 protein binding activity and potassium channel activity. Involved in detection of hypoxic conditions in blood by carotid body chemoreceptor signaling and regulation of action potential firing rate. Predicted to be active in plasma membrane. Is expressed in early conceptus; heart; and secondary oocyte. Human ortholog(s) of this gene implicated in primary pulmonary hypertension. Orthologous to human KCNK3 (potassium two pore domain channel subfamily K member 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in adrenal adult (RPKM 1700.1) and heart adult (RPKM 66.4) See more
    Orthologs
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    Genomic context

    See Kcnk3 in Genome Data Viewer
    Location:
    5 B1; 5 16.68 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (30745514..30782614)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (30588170..30625270)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_12752 Neighboring gene ciliary microtubule inner protein 2C Neighboring gene calcium and integrin binding family member 4 Neighboring gene predicted gene, 40272 Neighboring gene predicted gene 9899 Neighboring gene STARR-seq mESC enhancer starr_12757 Neighboring gene STARR-seq mESC enhancer starr_12759 Neighboring gene solute carrier family 35, member F6 Neighboring gene microRNA 5625 Neighboring gene STARR-positive B cell enhancer ABC_E4748 Neighboring gene centromere protein A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (6)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables S100 protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables S100 protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables monoatomic ion channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables open rectifier potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables open rectifier potassium channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables outward rectifier potassium channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables outward rectifier potassium channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables potassium ion leak channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables potassium ion leak channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables potassium ion leak channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables sodium channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cellular response to acidic pH IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to hypoxia ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to zinc ion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cochlea development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in detection of hypoxic conditions in blood by carotid body chemoreceptor signaling IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in monoatomic ion transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cytosolic calcium ion concentration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in potassium ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in potassium ion transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of action potential firing rate IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of resting membrane potential IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of resting membrane potential ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to xenobiotic stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to xenobiotic stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    potassium channel subfamily K member 3
    Names
    TWIK-related acid-sensitive K(+) channel 1
    acid-sensitive potassium channel protein TASK-1
    cardiac two pore background K(+) channel
    two pore K(+) channel KT3.1
    two pore potassium channel KT3.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010608.3NP_034738.1  potassium channel subfamily K member 3

      See identical proteins and their annotated locations for NP_034738.1

      Status: VALIDATED

      Source sequence(s)
      AC105298, AEKQ02160270
      Consensus CDS
      CCDS19160.1
      UniProtKB/Swiss-Prot
      O35111, O35163
      Related
      ENSMUSP00000098987.2, ENSMUST00000066295.5
      Conserved Domains (1) summary
      pfam07885
      Location:77132
      Ion_trans_2; Ion channel

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      30745514..30782614
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)