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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001303614.2 → NP_001290543.1 protein Smaug homolog 2 isoform b
See identical proteins and their annotated locations for NP_001290543.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and includes an alternate 3' terminal exon, compared to variant 1. The encoded isoform (b) is shorter, and has a distinct C-terminus, compared to isoform a. Variants 2 and 15-19 all encode the same isoform (b).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS77295.1
- UniProtKB/TrEMBL
- M0QZ22, Q66K25
- Related
- ENSP00000470237.1, ENST00000598913.5
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384565.1 → NP_001371494.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384566.1 → NP_001371495.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384568.1 → NP_001371497.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384569.1 → NP_001371498.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384570.1 → NP_001371499.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384571.1 → NP_001371500.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384573.1 → NP_001371502.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (9) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384574.2 → NP_001371503.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Related
- ENSP00000484229.1, ENST00000610417.5
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384575.1 → NP_001371504.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (11) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384576.1 → NP_001371505.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (12) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384577.1 → NP_001371506.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (13) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384578.1 → NP_001371507.1 protein Smaug homolog 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (14) differs in the 5' UTR compared to variant 1. Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384580.1 → NP_001371509.1 protein Smaug homolog 2 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (15) differs in the 5' UTR compared to variant 2. Variants 2 and 15-19 all encode the same isoform (b).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS77295.1
- UniProtKB/TrEMBL
- M0QZ22, Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384581.1 → NP_001371510.1 protein Smaug homolog 2 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (16) differs in the 5' UTR compared to variant 2. Variants 2 and 15-19 all encode the same isoform (b).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS77295.1
- UniProtKB/TrEMBL
- M0QZ22, Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384582.1 → NP_001371511.1 protein Smaug homolog 2 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (17) differs in the 5' UTR compared to variant 2. Variants 2 and 15-19 all encode the same isoform (b).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS77295.1
- UniProtKB/TrEMBL
- M0QZ22, Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384583.1 → NP_001371512.1 protein Smaug homolog 2 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (18) differs in the 5' UTR compared to variant 2. Variants 2 and 15-19 all encode the same isoform (b).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS77295.1
- UniProtKB/TrEMBL
- M0QZ22, Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384584.1 → NP_001371513.1 protein Smaug homolog 2 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (19) differs in the 5' UTR compared to variant 2. Variants 2 and 15-19 all encode the same isoform (b).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS77295.1
- UniProtKB/TrEMBL
- M0QZ22, Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384585.1 → NP_001371514.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (20) encodes isoform c.
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384586.1 → NP_001371515.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (21) differs in the 5' UTR compared to variant 20. Variants 20-29 all encode the same isoform (c).
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384587.1 → NP_001371516.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (22) differs in the 5' UTR compared to variant 20. Variants 20-29 all encode the same isoform (c).
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384588.1 → NP_001371517.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (23) differs in the 5' UTR compared to variant 20. Variants 20-29 all encode the same isoform (c).
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384589.1 → NP_001371518.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (24) differs in the 5' UTR compared to variant 20. Variants 20-29 all encode the same isoform (c).
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384590.1 → NP_001371519.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (25) differs in the 5' UTR compared to variant 20. Variants 20-29 all encode the same isoform (c).
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384591.1 → NP_001371520.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (26) differs in the 5' UTR compared to variant 20. Variants 20-29 all encode the same isoform (c).
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384592.1 → NP_001371521.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (27) differs in the 5' UTR compared to variant 20. Variants 20-29 all encode the same isoform (c).
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384593.1 → NP_001371522.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (28) differs in the 5' UTR compared to variant 20. Variants 20-29 all encode the same isoform (c).
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384594.1 → NP_001371523.1 protein Smaug homolog 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (29) differs in the 5' UTR compared to variant 20. Variants 20-29 all encode the same isoform (c).
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_001384595.1 → NP_001371524.1 protein Smaug homolog 2 isoform d
Status: VALIDATED
- Source sequence(s)
-
AC005239, AC011445
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
-
NM_018028.4 → NP_060498.2 protein Smaug homolog 2 isoform a
See identical proteins and their annotated locations for NP_060498.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a). Variants 1 and 3-14 all encode the same isoform (a).
- Source sequence(s)
-
AC005239, AC011445
- Consensus CDS
-
CCDS33020.1
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
- Related
- ENSP00000317224.5, ENST00000314471.10
- Conserved Domains (1) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
RNA
-
NR_169271.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC005239, AC011445
-
NR_169272.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC005239, AC011445
-
NR_169273.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC005239, AC011445
-
NR_169274.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC005239, AC011445
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
39342421..39390764
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017026919.2 → XP_016882408.1 protein Smaug homolog 2 isoform X1
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (2) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
- smart00454
Location:301 → 359
- SAM; Sterile alpha motif
-
XM_047439027.1 → XP_047294983.1 protein Smaug homolog 2 isoform X1
- UniProtKB/TrEMBL
-
Q66K25
-
XM_011527057.3 → XP_011525359.1 protein Smaug homolog 2 isoform X1
See identical proteins and their annotated locations for XP_011525359.1
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (2) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
- smart00454
Location:301 → 359
- SAM; Sterile alpha motif
-
XM_011527062.3 → XP_011525364.1 protein Smaug homolog 2 isoform X1
See identical proteins and their annotated locations for XP_011525364.1
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (2) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
- smart00454
Location:301 → 359
- SAM; Sterile alpha motif
-
XM_047439028.1 → XP_047294984.1 protein Smaug homolog 2 isoform X1
- UniProtKB/TrEMBL
-
Q66K25
-
XM_047439030.1 → XP_047294986.1 protein Smaug homolog 2 isoform X2
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
-
XM_047439031.1 → XP_047294987.1 protein Smaug homolog 2 isoform X2
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
-
XM_047439029.1 → XP_047294985.1 protein Smaug homolog 2 isoform X2
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
-
XM_047439035.1 → XP_047294991.1 protein Smaug homolog 2 isoform X2
- UniProtKB/TrEMBL
- M0QZ22, Q66K25
-
XM_047439034.1 → XP_047294990.1 protein Smaug homolog 2 isoform X2
- UniProtKB/TrEMBL
- M0QZ22, Q66K25
-
XM_011527060.4 → XP_011525362.1 protein Smaug homolog 2 isoform X1
See identical proteins and their annotated locations for XP_011525362.1
- UniProtKB/TrEMBL
-
Q66K25
- Conserved Domains (2) summary
-
- cd09557
Location:296 → 358
- SAM_Smaug; SAM domain of Smaug subfamily
- smart00454
Location:301 → 359
- SAM; Sterile alpha motif
-
XM_047439033.1 → XP_047294989.1 protein Smaug homolog 2 isoform X2
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
-
XM_047439032.1 → XP_047294988.1 protein Smaug homolog 2 isoform X2
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
-
XM_047439036.1 → XP_047294992.1 protein Smaug homolog 2 isoform X2
- UniProtKB/TrEMBL
- M0QZ22, Q66K25
Reference GRCh38.p14 PATCHES
Genomic
-
NW_025791808.1 Reference GRCh38.p14 PATCHES
- Range
-
122803..137509
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
42146695..42195044
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054321350.1 → XP_054177325.1 protein Smaug homolog 2 isoform X1
- UniProtKB/TrEMBL
-
Q66K25
-
XM_054321351.1 → XP_054177326.1 protein Smaug homolog 2 isoform X1
- UniProtKB/TrEMBL
-
Q66K25
-
XM_054321349.1 → XP_054177324.1 protein Smaug homolog 2 isoform X1
- UniProtKB/TrEMBL
-
Q66K25
-
XM_054321352.1 → XP_054177327.1 protein Smaug homolog 2 isoform X1
- UniProtKB/TrEMBL
-
Q66K25
-
XM_054321353.1 → XP_054177328.1 protein Smaug homolog 2 isoform X1
- UniProtKB/TrEMBL
-
Q66K25
-
XM_054321355.1 → XP_054177330.1 protein Smaug homolog 2 isoform X2
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
-
XM_054321354.1 → XP_054177329.1 protein Smaug homolog 2 isoform X2
- UniProtKB/Swiss-Prot
- A5Z0M6, Q5PRF9, Q6P194
- UniProtKB/TrEMBL
-
Q66K25
-
XM_054321356.1 → XP_054177331.1 protein Smaug homolog 2 isoform X2
- UniProtKB/TrEMBL
- M0QZ22, Q66K25