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    Zscan4a zinc finger and SCAN domain containing 4A [ Mus musculus (house mouse) ]

    Gene ID: 434555, updated on 9-Dec-2024

    Summary

    Official Symbol
    Zscan4aprovided by MGI
    Official Full Name
    zinc finger and SCAN domain containing 4Aprovided by MGI
    Primary source
    MGI:MGI:3708481
    See related
    Ensembl:ENSMUSG00000110097 AllianceGenome:MGI:3708481
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Acts upstream of or within embryo implantation. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Zscan4a in Genome Data Viewer
    Location:
    7 A1; 7 6.65 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (10528168..10532992, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (10794241..10799065, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene 5130 Neighboring gene vomeronasal 1 receptor 71 Neighboring gene STARR-seq mESC enhancer starr_18015 Neighboring gene STARR-seq mESC enhancer starr_18016 Neighboring gene STARR-seq mESC enhancer starr_18017 Neighboring gene zinc finger protein 184 (Kruppel-like) pseudogene Neighboring gene aurora kinase C pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033707.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC151720
      Related
      ENSMUST00000210573.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      10528168..10532992 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)