Fam228a family with sequence similarity 228, member A [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Fam228aprovided by MGI
Official Full Name: family with sequence similarity 228, member Aprovided by MGI
Primary source: MGI:MGI:1922105
See related: Ensembl:ENSMUSG00000079177 AllianceGenome:MGI:1922105
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 4930417G10Rik
Summary: Is expressed in brain and testis. Orthologous to human FAM228A (family with sequence similarity 228 member A). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in testis adult (RPKM 4.7), frontal lobe adult (RPKM 1.0) and 9 other tissues See more
Orthologs: human all
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Genomic context

Location:: 12 A1.1; 12 2.09 cM

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	12	NC_000078.7 (4763668..4788652, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	12	NC_000078.6 (4713805..4738439, complement)

Chromosome 12 - NC_000078.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

General gene information

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Markers

4930417G10Rik (e-PCR), detects polymorphism
- UniSTS:265249

13.MMHAP62FRE7.seq (e-PCR)
- UniSTS:123177

AI327390 (e-PCR)
- UniSTS:164493

RH128822 (e-PCR)
- UniSTS:212130

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: protein FAM228A

Names: UPF0638 protein C2orf84 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.