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    lncRNA:CR32553 long non-coding RNA:CR32553 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 318087, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR32553provided by FlyBase
    Official Full Name
    long non-coding RNA:CR32553provided by FlyBase
    Primary source
    FLYBASE:FBgn0052553
    Locus tag
    Dmel_CR32553
    See related
    AllianceGenome:FB:FBgn0052553
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG32553; CR32553; Dmel\CR32553
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    Genomic context

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    See lncRNA:CR32553 in Genome Data Viewer
    Location:
    16F7-16F7; 1-59 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (18124575..18127027, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (18018608..18021060, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45606 Neighboring gene mir-969 stem loop Neighboring gene mir-210 stem loop Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The transcription factor Cabut coordinates energy metabolism and the circadian clock in response to sugar sensing. Bartok O, et al. EMBO J, 2015 Jun 3. PMID 25916830, Free PMC Article
    2. Computational identification of Drosophila microRNA genes. Lai EC, et al. Genome Biol, 2003. PMID 12844358, Free PMC Article
    3. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR32553-RB; Dmel\lncRNA:CR32553-RB; CR32553-RB; Dmel\CR32553-RB

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      18124575..18127027 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_144650.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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