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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001401513.1 → NP_001388442.1 POTE ankyrin domain family member A isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC111034, AC158566
- UniProtKB/TrEMBL
-
A0A1B0GRY3
- Related
- ENSMUSP00000147714.2, ENSMUST00000209669.2
-
NM_026256.2 → NP_080532.1 POTE ankyrin domain family member A isoform 1
See identical proteins and their annotated locations for NP_080532.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1, also known as Gsarp1) represents the shortest transcript and encodes the shortest isoform (1).
- Source sequence(s)
-
AK015473
- UniProtKB/TrEMBL
- Q9D5D4, Q9D5M0
- Related
-
ENSMUST00000211657.2
- Conserved Domains (4) summary
-
- cd00204
Location:76 → 200
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:118 → 210
- Ank_2; Ankyrin repeats (3 copies)
- pfam13857
Location:199 → 253
- Ank_5; Ankyrin repeats (many copies)
- sd00045
Location:116 → 144
- ANK; ANK repeat [structural motif]
-
NM_027618.1 → NP_081894.1 POTE ankyrin domain family member A isoform 2
See identical proteins and their annotated locations for NP_081894.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2, also known as Gsarp2) differs in the 3' UTR and includes several additional exons in the 3' coding region, compared to variant 1. The resulting isoform (2) is longer and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC158566, AK015012
- Consensus CDS
-
CCDS52535.1
- UniProtKB/TrEMBL
- A5H0M4, Q9CUQ9
- Related
- ENSMUSP00000080069.5, ENSMUST00000081321.5
- Conserved Domains (4) summary
-
- cd00204
Location:76 → 200
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:118 → 210
- Ank_2; Ankyrin repeats (3 copies)
- pfam13857
Location:199 → 253
- Ank_5; Ankyrin repeats (many copies)
- sd00045
Location:116 → 144
- ANK; ANK repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000074.7 Reference GRCm39 C57BL/6J
- Range
-
27937662..28110476
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011242159.3 → XP_011240461.1 POTE ankyrin domain family member A isoform X1
- Conserved Domains (3) summary
-
- COG0666
Location:89 → 281
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- sd00045
Location:116 → 144
- ANK; ANK repeat [structural motif]
- pfam12796
Location:85 → 176
- Ank_2; Ankyrin repeats (3 copies)
-
XM_006509192.4 → XP_006509255.1 POTE ankyrin domain family member A isoform X2
- UniProtKB/TrEMBL
-
A0A1B0GS20
- Conserved Domains (3) summary
-
- COG0666
Location:89 → 281
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- sd00045
Location:116 → 144
- ANK; ANK repeat [structural motif]
- pfam12796
Location:85 → 176
- Ank_2; Ankyrin repeats (3 copies)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001033467.1: Suppressed sequence
- Description
- NM_001033467.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.