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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001378768.1 → NP_001365697.1 SLIT and NTRK-like protein 5 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC102368
- Conserved Domains (5) summary
-
- COG4886
Location:97 → 344
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:87 → 104
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:154 → 214
- LRR_8; Leucine rich repeat
- cd21340
Location:416 → 588
- PPP1R42; protein phosphatase 1 regulatory subunit 42
- cl15307
Location:588 → 624
- TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
-
NM_001378769.1 → NP_001365698.1 SLIT and NTRK-like protein 5 isoform 1 precursor
Status: VALIDATED
- Source sequence(s)
-
AC102368
- UniProtKB/Swiss-Prot
- Q810B7, Q9CT21
- Conserved Domains (6) summary
-
- COG4886
Location:72 → 319
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00031
Location:435 → 458
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:62 → 79
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:129 → 189
- LRR_8; Leucine rich repeat
- cd21340
Location:391 → 563
- PPP1R42; protein phosphatase 1 regulatory subunit 42
- cl15307
Location:563 → 599
- TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
-
NM_001378770.1 → NP_001365699.1 SLIT and NTRK-like protein 5 isoform 1 precursor
Status: VALIDATED
- Source sequence(s)
-
AC102368
- UniProtKB/Swiss-Prot
- Q810B7, Q9CT21
- Conserved Domains (6) summary
-
- COG4886
Location:72 → 319
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00031
Location:435 → 458
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:62 → 79
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:129 → 189
- LRR_8; Leucine rich repeat
- cd21340
Location:391 → 563
- PPP1R42; protein phosphatase 1 regulatory subunit 42
- cl15307
Location:563 → 599
- TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
-
NM_198865.1 → NP_942565.1 SLIT and NTRK-like protein 5 isoform 1 precursor
Status: VALIDATED
- Source sequence(s)
-
AK173062, BC065107, BQ769394, BY274593, BY728649, CB526109
- Consensus CDS
-
CCDS27328.1
- UniProtKB/Swiss-Prot
- Q810B7, Q9CT21
- Related
- ENSMUSP00000041499.8, ENSMUST00000042767.9
- Conserved Domains (6) summary
-
- COG4886
Location:72 → 319
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00031
Location:435 → 458
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:62 → 79
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:129 → 189
- LRR_8; Leucine rich repeat
- cd21340
Location:391 → 563
- PPP1R42; protein phosphatase 1 regulatory subunit 42
- cl15307
Location:563 → 599
- TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000080.7 Reference GRCm39 C57BL/6J
- Range
-
111912547..111920576
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_029273.2: Suppressed sequence
- Description
- NM_029273.2: This RefSeq was permanently suppressed because currently there is not sufficient data to support this transcript.