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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001282992.2 → NP_001269921.1 pericentrin isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has an alternate splice site in the coding region, but maintains the reading frame, compared to variant 1. The resulting isoform (b) lacks an internal segment, compared to isoform a.
- Source sequence(s)
-
AC141477, AC158618
- Consensus CDS
-
CCDS88027.1
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- UniProtKB/TrEMBL
-
A0A1W2P737
- Related
- ENSMUSP00000151534.2, ENSMUST00000217838.2
- Conserved Domains (6) summary
-
- COG1196
Location:475 → 1375
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5281
Location:305 → 577
- COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
- pfam09455
Location:1050 → 1214
- Cas_DxTHG; CRISPR-associated (Cas) DxTHG family
- pfam10495
Location:2701 → 2779
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
- pfam12474
Location:154 → 308
- PKK; Polo kinase kinase
- pfam15290
Location:1413 → 1479
- Syntaphilin; Golgi-localized syntaxin-1-binding clamp
-
NM_001428741.1 → NP_001415670.1 pericentrin isoform c
Status: VALIDATED
- Source sequence(s)
-
AC141477, AC158618
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
-
NM_001428742.1 → NP_001415671.1 pericentrin isoform d
Status: VALIDATED
- Source sequence(s)
-
AC141477
- UniProtKB/TrEMBL
-
Q80U10
-
NM_008787.4 → NP_032813.3 pericentrin isoform a
See identical proteins and their annotated locations for NP_032813.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AC141477, AC158618
- Consensus CDS
-
CCDS23944.1
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- UniProtKB/TrEMBL
-
F8VPV0
- Related
- ENSMUSP00000001179.6, ENSMUST00000001179.7
- Conserved Domains (6) summary
-
- COG1196
Location:475 → 1375
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG5281
Location:305 → 577
- COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
- pfam09455
Location:1050 → 1214
- Cas_DxTHG; CRISPR-associated (Cas) DxTHG family
- pfam10495
Location:2719 → 2797
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
- pfam12474
Location:154 → 308
- PKK; Polo kinase kinase
- pfam15290
Location:1413 → 1479
- Syntaphilin; Golgi-localized syntaxin-1-binding clamp
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000076.7 Reference GRCm39 C57BL/6J
- Range
-
76187098..76279988 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030244950.2 → XP_030100810.1 pericentrin isoform X8
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1368
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1218 → 1551
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2789 → 2867
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_011243383.4 → XP_011241685.1 pericentrin isoform X5
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1375
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1218 → 1558
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2796 → 2874
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_036155685.1 → XP_036011578.1 pericentrin isoform X13
- Conserved Domains (3) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1386
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam10495
Location:2712 → 2790
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_017313839.3 → XP_017169328.1 pericentrin isoform X2
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1386
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1229 → 1564
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2807 → 2885
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_011243384.4 → XP_011241686.1 pericentrin isoform X7
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1369
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1219 → 1552
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2790 → 2868
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_006513353.5 → XP_006513416.1 pericentrin isoform X15
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1376
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1219 → 1559
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2702 → 2780
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_006513348.5 → XP_006513411.1 pericentrin isoform X10
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1376
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1219 → 1559
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2779 → 2857
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_011243382.4 → XP_011241684.1 pericentrin isoform X4
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1376
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1219 → 1559
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2797 → 2875
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_036155686.1 → XP_036011579.1 pericentrin isoform X14
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (3) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1380
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam10495
Location:2706 → 2784
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_036155684.1 → XP_036011577.1 pericentrin isoform X9
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (3) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1380
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam10495
Location:2783 → 2861
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_017313840.3 → XP_017169329.1 pericentrin isoform X3
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1380
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1230 → 1558
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2801 → 2879
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_017313843.3 → XP_017169332.1 pericentrin isoform X12
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1387
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1230 → 1565
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2713 → 2791
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_017313841.3 → XP_017169330.1 pericentrin isoform X6
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1387
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1230 → 1565
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2790 → 2868
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_017313842.3 → XP_017169331.1 pericentrin isoform X11
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1387
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1230 → 1565
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2731 → 2809
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_017313838.3 → XP_017169327.1 pericentrin isoform X1
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (4) summary
-
- PTZ00121
Location:133 → 647
- PTZ00121; MAEBL; Provisional
- COG1196
Location:475 → 1387
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:1230 → 1565
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2808 → 2886
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_036155687.1 → XP_036011580.1 pericentrin isoform X16
- UniProtKB/Swiss-Prot
- A0JBT0, A0JBT1, P48725
- Conserved Domains (3) summary
-
- COG1196
Location:545 → 897
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:4 → 896
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:2318 → 2396
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_017313845.3 → XP_017169334.1 pericentrin isoform X17
- UniProtKB/TrEMBL
-
Q80U10
- Conserved Domains (3) summary
-
- COG1196
Location:138 → 470
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:313 → 648
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:1891 → 1969
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_006513356.3 → XP_006513419.1 pericentrin isoform X19
- Related
-
ENSMUST00000220395.2
- Conserved Domains (3) summary
-
- COG1196
Location:138 → 459
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:302 → 642
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam10495
Location:1785 → 1863
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein
-
XM_036155688.1 → XP_036011581.1 pericentrin isoform X18
- UniProtKB/TrEMBL
-
Q80U10
- Conserved Domains (3) summary
-
- COG1196
Location:138 → 470
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02169
Location:1114 → 1392
- SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
- pfam10495
Location:1796 → 1874
- PACT_coil_coil; Pericentrin-AKAP-450 domain of centrosomal targeting protein