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    LOC105370236 uncharacterized LOC105370236 [ Homo sapiens (human) ]

    Gene ID: 105370236, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105370236
    Gene description
    uncharacterized LOC105370236
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105370236 in Genome Data Viewer
    Location:
    13q21.31
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (63593893..63672628)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (62815439..62894174)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903236 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:63978433-63978933 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_33081 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_33146 Neighboring gene uncharacterized LOC105370237 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:64169591-64170092 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:64170093-64170592 Neighboring gene Sharpr-MPRA regulatory region 1301 Neighboring gene long intergenic non-protein coding RNA 395 Neighboring gene uncharacterized LOC105370235 Neighboring gene olfactory receptor family 7 subfamily E member 156 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      63593893..63672628
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_942019.2 RNA Sequence

    2. XR_942020.1 RNA Sequence

    3. XR_942018.2 RNA Sequence

    4. XR_942022.2 RNA Sequence

    5. XR_942023.2 RNA Sequence

    6. XR_942021.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      62815439..62894174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007084117.1 RNA Sequence

    2. XR_007084116.1 RNA Sequence

    3. XR_007084115.1 RNA Sequence

    4. XR_007084119.1 RNA Sequence

    5. XR_007084120.1 RNA Sequence

    6. XR_007084118.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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