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    H2ACP2 H2AC histone family pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 115482716, updated on 10-Dec-2024

    Summary

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    Official Symbol
    H2ACP2provided by HGNC
    Official Full Name
    H2AC histone family pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:54439
    See related
    AllianceGenome:HGNC:54439
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See H2ACP2 in Genome Data Viewer
    Location:
    2p22.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (33056297..33056508, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (33102335..33102546, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (33281364..33281575, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374453 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:33111152-33111352 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_58246 Neighboring gene uncharacterized LOC100271832 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11344 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11345 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11346 Neighboring gene latent transforming growth factor beta binding protein 1 Neighboring gene Sharpr-MPRA regulatory region 2981 Neighboring gene NANOG hESC enhancer GRCh37_chr2:33281163-33281664 Neighboring gene Sharpr-MPRA regulatory region 6273 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:33294707-33295906 Neighboring gene tRNA-yW synthesizing protein 1 homolog pseudogene 1 Neighboring gene NANOG hESC enhancer GRCh37_chr2:33444164-33444665 Neighboring gene RNA, 5S ribosomal pseudogene 91

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_066061.2 

      Range
      100..311
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      33056297..33056508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      33102335..33102546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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