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    HSPBAP1P1 HSPBAP1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 133039962, updated on 28-Oct-2024

    Summary

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    Official Symbol
    HSPBAP1P1provided by HGNC
    Official Full Name
    HSPBAP1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:56946
    See related
    Ensembl:ENSG00000277315 AllianceGenome:HGNC:56946
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See HSPBAP1P1 in Genome Data Viewer
    Location:
    20p12.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (7867329..7867616)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (7909120..7909407)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (7847976..7848263)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372518 Neighboring gene ReSE screen-validated silencer GRCh37_chr20:7756914-7757097 Neighboring gene serine and arginine rich splicing factor 10 pseudogene 2 Neighboring gene NANOG hESC enhancer GRCh37_chr20:7831618-7832119 Neighboring gene NANOG hESC enhancer GRCh37_chr20:7832120-7832620 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr20:7837050-7838249 Neighboring gene hydroxyacid oxidase 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17535 Neighboring gene NANOG hESC enhancer GRCh37_chr20:7936767-7937438 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr20:7964803-7965420 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12666 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12667 Neighboring gene thioredoxin related transmembrane protein 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See Variation Viewer (GRCh37.p13)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_242245.1 

      Range
      101..388
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      7867329..7867616
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      7909120..7909407
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases